bims-mitdis Biomed News
on Mitochondrial disorders
Issue of 2026–05–03
78 papers selected by
Catalina Vasilescu, Helmholz Munich



  1. Nucleic Acids Res. 2026 Apr 23. pii: gkag233. [Epub ahead of print]54(8):
      Mitochondrial DNA replication occurs at contact sites between the endoplasmic reticulum (ER) and mitochondria (ERMCS). Beyond the known role of the tubular ER protein RTN4, the factors regulating this process are poorly defined. Here, we show that repressing the ER protein ERLIN2 in human fibroblasts depletes ER-mitochondrial contact sites and inhibits mitochondrial DNA replication, as does silencing RTN4 or the ER-mitochondrial tether GRP75. GRP75 or RTN4 scarcity also decreases the level of the mitochondrial calcium uniporter (MCU), whose inhibition blocks mitochondrial DNA synthesis. Because ERMCS depletion did not diminish mitochondrial calcium, and MCU complex can transport manganese, we tested whether manganese could bypass these defects. Manganese supplementation restored mitochondrial DNA replication in cells lacking ERMCS or with inhibited MCU, identifying manganese as a critical mediator. We then considered mitochondrial transcription as a potential manganese target, since it provides both transcripts for gene expression and primers for DNA replication. In vitro, manganese inhibits transcription re-start and stimulates RNA synthesis at the light-strand origin of replication. These findings support a model in which ER-mitochondrial contact sites, in conjunction with MCU, deliver manganese from the ER to mitochondria to promote DNA replication, potentially by modulating mitochondrial RNA polymerase activity.
    DOI:  https://doi.org/10.1093/nar/gkag233
  2. Protein Sci. 2026 May;35(5): e70585
      Mitochondrial function depends on the continuous import of hundreds of nuclear-encoded proteins. Targeting and translocation of mitochondrial proteins is a multistep process that is inherently vulnerable to defects in cytosolic quality control systems as well as perturbations in mitochondrial protein import machinery and organelle function. Failure of mitochondrial protein import has dual consequences: it compromises mitochondrial biogenesis and activity, and it poses a cytosolic proteotoxic threat due to the accumulation of unimported precursor proteins. Accordingly, mitochondrial protein import defects are detrimental to cellular homeostasis and are associated with a wide range of disorders, including metabolic and neurodegenerative diseases. Cells therefore rely on layered quality control systems that monitor mitochondrial protein biogenesis and mitigate stress arising from mislocalized mitochondrial proteins. In this review, we summarize recent progress in understanding pathways that modulate mitochondrial protein import and the fate of unimported proteins in mammals. We highlight cytosolic and mitochondrial protein quality control mechanisms and discuss how import defects are translated into cellular stress responses and mitochondrial protective programs to restore cellular and mitochondrial homeostasis.
    Keywords:  Proteostasis; mitochondrial dysfunction; mitochondrial protein import; quality control mechanisms; stress responses
    DOI:  https://doi.org/10.1002/pro.70585
  3. Front Neurosci. 2026 ;20 1775132
       Background: MSTO1 encodes a regulator of mitochondrial fusion. Mutations in MSTO1 are linked to a rare mitochondrial disorder characterized by early-onset myopathy and cerebellar ataxia, with 31 cases reported globally to date, which underscores its exceptional rarity.
    Methods: We conducted comprehensive clinical, molecular, and biochemical investigations in a patient harboring novel MSTO1 variants.
    Results: We identified a patient presenting with adult-onset progressive ataxia and cerebellar atrophy who carried two novel compound heterozygous variants in the MSTO1 gene (c.756A>G, p.Glu252Glu; c.1339G>A, p.Glu447Lys). Brain MRI revealed marked cerebellar abnormalities, but the patient's clinical symptoms remained relatively mild with preserved daily function. This milder phenotype, characterized by adult onset and later disease presentation, contrasts with the more severe neurological deficits reported in a previously described case. Functional studies revealed significantly reduced MSTO1 protein expression, mtDNA depletion, and impaired mitochondrial function, as reflected by decreased mitochondrial membrane potential and respiratory capacity, suggesting a pathogenic role for these variants. Comparative analysis with fibroblasts from a previously reported case with MSTO1 mutation revealed notable differences in the severity of mitochondrial dysfunction, suggesting potential genotype-phenotype correlations.
    Conclusion: Our findings provide evidence linking the novel MSTO1 variants c.756A>G and c.1339G>A to mitochondrial dysfunction and broaden the phenotypic spectrum of MSTO1-related mitochondrial disorders to encompass a milder, adult-onset form of cerebellar ataxia. These results emphasize the importance of integrated clinical and functional approaches in evaluating variant pathogenicity and in elucidating the clinical and molecular heterogeneity of MSTO1-related mitochondrial disorders.
    Keywords:  MSTO1; MSTO1-related mitochondrial disorders; cerebellar ataxia; cerebellar atrophy; mitochondrial fusion
    DOI:  https://doi.org/10.3389/fnins.2026.1775132
  4. Nat Commun. 2026 Apr 30.
      Mitochondrial dysfunction is widely implicated in human disease, yet whether it plays a causal role and why effects are tissue-specific remain unclear. Here, we analyse over 15,000 RNA-sequencing datasets from 49 tissue types integrated with germline genetic data to investigate the impact of mitochondrial DNA (mtDNA) transcription on disease risk. We identify 25 nuclear genetic variants associated with mtDNA transcript abundance, revealing gene- and tissue-specific regulatory architectures. We then develop tissue-specific genetic scores to predict mtDNA transcript levels and validate them in independent datasets. Applying these scores to 377,439 UK Biobank participants reveals significant associations between predicted mtDNA transcript abundance and multiple common diseases and quantitative traits, many showing marked tissue specificity, including associations with hypertension and Parkinson's disease in biologically relevant tissues. These findings provide genetic evidence that variation in mtDNA transcriptional processes contributes to complex disease biology and highlight mitochondrial RNA processing as a compelling therapeutic target.
    DOI:  https://doi.org/10.1038/s41467-026-72649-5
  5. Mol Psychiatry. 2026 Apr 29.
      Mitochondrial diseases, caused by mutations in either mitochondrial or nuclear DNA, are highly complex genetic disorders characterized by faulty oxidative phosphorylation. Adeno-associated virus (AAV)-based gene therapy with its broad and customizable tissue tropism achieved through natural and engineered serotypes offers a highly effective platform for delivering therapeutic genes to affected tissues. However, the intricate genetics and biology of mitochondria present unique challenges for the development of AAV-based therapies. While gene replacement therapy remains a viable strategy for correcting nuclear gene defects, mutations in mtDNA require specialized approaches, such as mitochondrially targeted, RNA-free base editors and nucleases capable of precise editing within the mitochondrial genome. As an alternative, allotopic expression, which involves expressing mitochondrial genes from the nuclear genome, is currently being evaluated in clinical trials but remains controversial, due to issues related to mitochondrial import and functional integration in the respiratory complexes. The clinical translation of AAV-mediated therapies for mitochondrial diseases still confronts several interrelated challenges, including efficient targeting of multiple affected organs, scalable and cost-effective vector manufacturing, and minimizing vector-associated toxicity. By integrating advanced genome editing technologies with sophisticated vector engineering and delivery strategies, AAV-based gene therapy stands as a transformative approach for addressing the broad and heterogeneous spectrum of primary mitochondrial disorders. Continued progress in overcoming current biological and technical barriers will be essential to realize the full therapeutic potential of AAVs.
    DOI:  https://doi.org/10.1038/s41380-026-03570-y
  6. J Mol Neurosci. 2026 Apr 30. pii: 72. [Epub ahead of print]76(2):
      Mitochondrial complex III (CIII) deficiency, resulting from abnormalities in its subunits or assembly factors, presents with diverse clinical manifestations. LYRM7-associated CIII deficiency is rare and typically presents with progressive neurodegeneration. We report a case series of LYRM7-associated CIII deficiency in two brothers, highlighting inflammatory demyelinating-like presentations, intrafamilial variability, and atypical disease progression. We present an investigational case series highlighting continuing challenges in diagnosing and managing LYRM7-associated mitochondrial complex III deficiency. Whole-exome sequencing (WES) was performed for diagnostic evaluation, followed by confirmatory Sanger sequencing and literature review of previously reported cases. Two brothers from a consanguineous family presented with ataxia, visual impairment, and progressive neurological deterioration including spasticity, seizures, cognitive decline, and motor weakness. Patient 1 (P1) experienced recurrent ataxic episodes beginning at 7 years of age, initially suspected to represent an inflammatory demyelinating disorder, while patient 2 (P2) demonstrated a more aggressive disease course with rapid neurological deterioration and early mortality at 8 years of age. Neuroimaging revealed cystic white matter changes suggestive of mitochondrial leukodystrophy and longitudinally extensive transverse myelitis (LETM) in both patients, differing from typical inflammatory demyelinating patterns. Genetic testing confirmed a pathogenic LYRM7 variant. Notably, intrafamilial clinical variability and the inflammatory-like presentation in P1- including LETM and optic neuritis mimicking neuromyelitis optica spectrum disorder (NMOSD)- distinguished our cases from previously reported patients. These findings expand the phenotypic spectrum of LYRM7-associated CIII deficiency and highlight diagnostic challenges. This case series expand the clinical spectrum of LYRM7-associated complex III deficiency and highlights relapsing inflammatory-like presentations as a potential diagnostic pitfall. Our findings emphasize the importance of considering mitochondrial disorders in children presenting with recurrent demyelinating-like episodes, atypical progression, or familial patterns. Early genetic diagnosis is essential for accurate diagnosis, counseling, and management of mitochondrial disorders.
    Keywords:   LYRM7 ; Inflammatory demyelinating-like presentation; Leukodystrophy; Mitochondrial complex III deficiency; Whole-exome sequencing
    DOI:  https://doi.org/10.1007/s12031-026-02527-8
  7. Cell Prolif. 2026 Apr 27. e70216
      Mitochondria play central roles in cellular energy metabolism and signal transduction, and maintenance of mitochondrial homeostasis is essential for proper cellular function. Rather than being regulated by individual genes alone, mitochondrial homeostasis is governed by coordinated functional modules, including glucose and lipid metabolism, the tricarboxylic acid (TCA) cycle, oxidative phosphorylation (OXPHOS), calcium handling, mitochondrial dynamics, mitochondrial reactive oxygen species (mtROS) regulation, and mitochondrial transcription and translation. However, how perturbation of these modules reshapes cellular states remains incompletely understood. Here, we combined targeted chemical perturbations with single-cell RNA sequencing (scRNA-seq) to systematically profile transcriptional responses to inhibition of core mitochondrial functional modules. Comparative analyses revealed both shared and module-specific transcriptional programs, including recurrent co-expression patterns across distinct perturbations. Analysis of mitochondrial gene expression across conditions implicated mtROS as an important regulator of mitochondrial respiratory chain (MRC) gene expression, potentially acting through activation of the mitochondrial integrated stress response (mtISR). Further comparative analysis of perturbations targeting individual MRC complexes uncovered distinct transcriptional and cellular consequences among complexes. Examination of cell-cycle dynamics showed that mitochondrial perturbations generally suppress cell proliferation; inhibition of most MRC complexes was associated with G1-phase arrest, whereas perturbation of complex III preferentially led to G2/M-phase arrest, potentially reflecting differential engagement of p53-associated signaling pathways. Finally, our analysis revealed both conserved and divergent transcriptional responses to mitochondrial perturbations between human and mouse cells. Together, these findings establish a systematic single-cell framework for dissecting mitochondrial functional modules and highlight both shared and function-specific principles by which mitochondrial perturbations influence cellular transcriptional states.
    Keywords:  cell‐cycle regulation; chemical perturbation; mitochondrial function; mitochondrial stress signaling; single‐cell transcriptomics
    DOI:  https://doi.org/10.1111/cpr.70216
  8. JIMD Rep. 2026 May;67 e70092
    MitoMDT Diagnostic Network for Genomics and Omics
      MRPS22-related mitochondrial disease (MIM#611719) is a rare autosomal recessive disorder caused by defects in the mitochondrial ribosomal protein S22, a component of the small mitoribosomal subunit essential for mitochondrial translation. Of the few reported cases, most present antenatally with a severe phenotype, conveying a poor prognosis. We describe a fetus with severe antenatal-onset MRPS22-related mitochondrial disease and the use of multi-omics in the molecular diagnosis. A primigravida underwent termination of pregnancy following identification of multiple congenital anomalies (hydrops fetalis, microcephaly, corpus callosal agenesis, periventricular cysts and cardiac hypertrophy) on ultrasound at 20 + 2 weeks' gestation, confirmed on fetal magnetic resonance imaging. Trio genome sequencing revealed compound heterozygous variants in MRPS22 (NM_020191.4: c.509G>A; p.(Arg170His) and c.565C>G; p.(Arg189Gly)). Rapid proteomic analysis demonstrated destabilisation of the small mitoribosomal subunit and combined reduction of OXPHOS complexes, supporting the pathogenicity of the variants. This case consolidates the antenatal phenotype of severe MRPS22-related disease and highlights the importance of considering mitochondrial disease in the differential diagnosis of congenital anomalies, especially hydrops fetalis and corpus callosum anomalies. This study provides evidence for the utility of multi-omic approaches (trio genome sequencing, proteomics) in confirming variant pathogenicity following pregnancy loss, enabling accurate diagnosis, and informing reproductive counselling for affected families.
    Keywords:  MRPS22; corpus callosum; genomic autopsy; hydrops fetalis; mitochondrial disease; mitoribosome; proteomics
    DOI:  https://doi.org/10.1002/jmd2.70092
  9. Prog Neuropsychopharmacol Biol Psychiatry. 2026 Apr 28. pii: S0278-5846(26)00119-3. [Epub ahead of print] 111722
      Parkinson's disease (PD) is the fastest growing neurodegenerative disorder worldwide. A critical barrier to therapeutic development is the incomplete understanding of mechanisms driving the selective degeneration of substantia nigra pars compacta (SNc) dopaminergic neurons (DaNs), the pathological hallmark of PD. Increasing evidence from preclinical and clinical studies now identifies metabolic instability as a central, early driver of this selective neurodegeneration, preceding both motor symptom onset and canonical structural pathology. These neurons face constant energetic pressure due to their autonomous pacemaking and complex axonal structures. This is compounded by their limited capacity for mitochondrial maintenance and calcium regulation. When these intrinsic constraints intersect with genetic susceptibility, dopamine-derived toxic metabolites, and disturbances in redox balance, metabolic resilience declines and vulnerability increases long before clinical symptoms emerge. In this review, we examine current insights into the metabolic foundations of PD across mitochondrial function, glucose and lipid utilization, amino acid pathways, and neuron-glia metabolic support. We highlight evidence suggesting that bioenergetic impairment precedes overt neurodegeneration and contributes to the variability in disease onset, progression, and therapeutic response. We also discuss emerging approaches aimed at strengthening metabolic capacity, including strategies to enhance nicotinamide adenine dinucleotide (NAD+) availability, support glycolysis and fatty acid oxidation, reduce oxidative stress, and modulate trophic signaling. Understanding how metabolic crisis shapes the trajectory of PD may offer new opportunities for earlier diagnosis and the development of targeted, disease-modifying interventions. Future work comparing metabolic phenotypes across patient subgroups will be essential for advancing precision treatment and clarifying the role of energy dysregulation in disease heterogeneity.
    Keywords:  Dopaminergic neuron; Metabolism; Mitochondria; Neuroinflammation; Parkinson’s disease
    DOI:  https://doi.org/10.1016/j.pnpbp.2026.111722
  10. Sci Adv. 2026 May;12(18): eaeb2995
      The translocase of the outer mitochondrial membrane (TOM) is the conserved entry gate for nuclear-encoded proteins. While structurally similar from yeast to humans, the human TOM complex operates in a cellular environment of vastly greater complexity. Here, we present a high-confidence map of the human TOM interactome using a membrane-permeable cross-linker to capture both stable and transient interactors. Alongside extensive overlap with known yeast partners, we uncover a set of human-specific interactors including regulatory factors and TOM-associated proteins. Mapping unique interprotein cross-links reveals conformational flexibility of the receptor TOM20 and enhanced recovery of peripheral components such as TOM70 and several associated quality control factors. Notably, we identify FKBP8 (FK506 binding protein 8) as a human-specific interactor that binds multiple TOM subunits and promotes organization of the complex. Our work redefines the human TOM complex as a dynamic, multifaceted hub coordinating biogenesis, quality control, and signaling. This expanded TOM landscape offers a rich resource for exploring mitochondrial regulation in health and disease.
    DOI:  https://doi.org/10.1126/sciadv.aeb2995
  11. bioRxiv. 2026 Apr 15. pii: 2026.04.13.718259. [Epub ahead of print]
      The mitochondrial genome (mtDNA), rich in repeats and prone to nuclear mitochondrial DNA segments (NUMTs), drives somatic mosaicism implicated in cancer, metabolic syndromes, and neurodegeneration, yet short-read sequencing yields incomplete catalogs, mapping artifacts, and false heteroplasmies. Here, we introduce MitoScope, a scalable long-read workflow to assemble mtDNA, perform high-fidelity variant calling, resolve heteroplasmy, and characterize NUMTs in benchmarking tissues from the Somatic Mosaicism Across Human Tissues (SMaHT) Network. MitoScope shows high sensitivity and precision, determines copy number, and uncovers low-frequency variants. We define an age- and tissue-dependent landscape of mtDNA mosaicism, including low-frequency pathogenic heteroplasmies, a bimodal heteroplasmy spectrum shaped by purifying selection, and age-accumulating deletions enriched for microhomology. Parallel profiling of NUMTs identifies high-confidence events with >2-fold more NUMTs than short-read surveys-with evidence of nonrandom trinucleotide contexts at breakpoints. These findings expose pervasive, tissue-resolved somatic mtDNA and NUMT instability with direct relevance for variant interpretation, aging, and human disease.
    DOI:  https://doi.org/10.64898/2026.04.13.718259
  12. bioRxiv. 2026 Apr 16. pii: 2026.04.13.718264. [Epub ahead of print]
      Mitochondrial calcium signaling integrates energy needs with energy production, amplifying or suppressing mitochondrial respiration in response to activity demand. Neuronal activity is tightly ATPcoupled to increases in mitochondrial calcium uptake, which stimulate the tricarboxylic acid cycle (TCA) and activate calcium-dependent enzymes important for ATP production via oxidative phosphorylation. The mitochondrial calcium uniporter (MCU) is the predominant source of matrix calcium and is differentially expressed across neuronal cell types, suggesting cell-type-specific differences in the coupling of activity-driven calcium levels and mitochondrial respiration. Here, we investigated whether elevating MCU expression enhances mitochondrial calcium uptake and oxidative phosphorylation in the hippocampus. We report that hippocampal mitochondria overexpressing MCU take up calcium at a faster rate without increased sensitivity to calcium overload. By modeling in vivo supply and demand, we found that hippocampal mitochondria overexpressing MCU are more efficient than control mitochondria at responding to increased bioenergetic demand. These findings reveal a role for MCU in modulating mitochondrial calcium uptake and boosting mitochondrial respiration under increasing demand, which contributes to our understanding of how specific cell types may adapt to different bioenergetic demands.
    DOI:  https://doi.org/10.64898/2026.04.13.718264
  13. FEBS Open Bio. 2026 May 01.
      Mitochondrial morphology is a key readout of cellular physiology and pathophysiology, yet its quantitative analysis in mitotic cells remains technically demanding due to their rounded, three-dimensional architecture. Volumetric imaging approaches, while comprehensive, require extensive Z-stack acquisition, high computational resources, and specialized image analysis expertise, collectively limiting throughput and accessibility. Here, we present RoundMi, a streamlined workflow for rapid, quantitative analysis of mitochondrial morphology in mitotic cells using single focal plane imaging. RoundMi integrates automated preprocessing via the Nellie plugin in Napari with downstream segmentation and quantification in MitoSkel. Focal plane selection is guided by DNA staining and mitochondrial signal to capture representative morphological features while minimizing acquisition time and phototoxicity. We validated RoundMi in mouse embryonic fibroblasts (MEFs) and HeLa cells, demonstrating robust detection of established morphological differences between wild-type and DRP1-deficient cells in both interphase and mitosis. Benchmarking against volumetric methods, including deconvolution and maximum intensity projection, confirmed that single-plane analysis provides a reliable proxy for mitochondrial morphology while avoiding projection-induced artifacts and substantially reducing computational demand. RoundMi is applicable across multiple cell types and compatible with live-cell imaging, offering a versatile, high-throughput solution for mitochondrial morphology analysis in dividing cells.
    Keywords:  image‐based tool for organelle analysis; mitochondria; mitochondrial morphology analysis; mitosis
    DOI:  https://doi.org/10.1002/2211-5463.70257
  14. bioRxiv. 2026 Apr 17. pii: 2026.04.16.717704. [Epub ahead of print]
      Mitochondria are dynamic signaling organelles that transduce metabolic and biochemical cues to facilitate cellular adaptation. Their complex structure and dynamics are essential for integrating metabolic pathways, responding to stressors, and communicating inter- and intra-cellular signals. While optimal mitochondrial activity is frequently linked to cellular and organismal health-influencing processes ranging from metabolism and regulated cell death to differentiation and growth-the mechanistic links between mitochondrial dysfunction and cellular defects leading to human disease remain incompletely understood. Understanding how mitochondrial shape and function are linked is crucial for deciphering the regulatory mechanisms of cell survival and fate. Here, we present a molecular resolution cryo-electron tomography (cryo-ET) imaging and image analysis platform to investigate the structure of isolated human mitochondria under different conditions. We describe optimized protocols for isolating mitochondria from human cells, vitrifying these samples with high-pressure freezing (HPF) using the waffle method, cryo-focused ion beam (cryo-FIB) milling to generate thin sections (lamellae), and imaging with cryo-transmission electron microscopy (cryo-TEM). This is complemented by a robust downstream processing pipeline for tilt-series alignment, tomogram reconstruction, and three-dimensional (3D) segmentation of tomograms using the latest state-of-the-art algorithms. With some variations, this versatile workflow is adaptable to other subcellular compartments for structural studies in isolation or within intact cells. Furthermore, our protocols provide a critical foundation for investigating the in-situ structure of protein machineries that govern key cellular processes.
    DOI:  https://doi.org/10.64898/2026.04.16.717704
  15. bioRxiv. 2026 Apr 19. pii: 2026.04.15.718770. [Epub ahead of print]
      Increased literature support the pathogenetic role of dysfunctional energetic metabolism in the setup and progression of organ damage and failure. Genetic diseases often offer the possibility to investigate pathogenetic mechanisms. In particular, excessive cardiac damage is the most frequent cause of mortality in Fabry disease (FD), a genetic condition caused by deficient α-galactosidase A (GLA) activity, leading to globotriaosylceramide (Gb3) accumulation. Beyond Gb3 storage, metabolic alterations and mitochondrial dysfunction, supported by in vitro evidence or studies in other tissues, may contribute to FD cardiomyopathy. This study investigated, for the first time, the mechanisms of mitochondrial involvement in FD, its role in determining cardiac manifestations, and its potential as a therapeutic target. We used a humanized FD mouse model (R301Q-Tg/GLA knockout), along with derived embryonic fibroblasts and neonatal and adult cardiomyocytes, to assess mitochondrial function across the lifespan. FD cells showed impaired mitophagy, reduced mitochondrial respiration, and increased reactive oxygen species production. Importantly, this mitochondrial dysfunction exacerbated the lysosomal deficit in FD cells, forming a vicious cycle. In cardiomyocytes, these alterations progressed with age, leading to the accumulation of dysfunctional mitochondria, energetic failure, and, in adult hearts, terminal mitochondrial damage and apoptosis. These events ultimately result in cardiac remodeling and dysfunction, including hypertrophy and diastolic impairment. Indeed, L-arginine supplementation, which promotes NO/PGC-1α-dependent mitochondrial rescue, prevented the development of cardiac abnormalities in FD mice. Our findings identify early mitochondrial dysfunction as a key driver of FD cardiomyopathy and support mitochondrial targeting, including L-arginine supplementation, as a promising adjuvant therapeutic strategy. The mechanistic link between lysosomal dysfunction, altered mitochondrial turnover, and energetic collapse emerges as a key targetable pathway in organ damage, extending beyond FD.
    Graphical abstract:
    Cardiac manifestations vs mitochondrial alterations in Fabry disease the visible tip and the hidden base of the iceberg: Cardiac manifestations in hR301Q Tg/KO mice become evident from 9 months of age. However, mitochondrial homeostasis is perturbed much earlier (neonatal to young stages), with impaired mitophagy, reduced mitochondrial respiration and membrane potential, increased ROS production and PGC-1α downregulation. At later stages, from 6 months of age, mitochondrial dysfunction progresses and begins to impact cellular energetics, as indicated by reduced ETC expression and the onset of energetic deficit (ATP reduction). The resulting energetic collapse, together with progressive mitochondrial leakage, leads to cardiomyocyte hypertrophy, apoptosis, and dysfunction, which become detectable from 9 months of age, when clinical signs emerge. These findings support a mechanistic model in which 1) lysosomal incompetence due to GLA deficit is the initiating event inducing impairment of mitophagy; 2) Unsuccessful mitophagy, induces downregulation of PGC-1a-dependent mitogenesis; 3) exhausted mitochondria accumulate, inducing energetic collapse (able to exacerbate lysosomal dysfunction and further perturb mitophagy in a vitious cycle); 4) ultimate mitochondrial leakage induces Cytochrome C release and apoptosis activation. This cascade of molecular events is responsible for clinical manifestations, and mitochondrial targeting prevents cardiac organ damage.
    Significance statement: Fabry disease is a rare genetic disorder in which cardiac complications are a major cause of death, yet underlying mechanisms remain unclear. Here, we identify mitochondrial dysfunction as an early pathogenic event associated with impaired mitophagy, whereby defective mitochondrial quality control both results from and exacerbates lysosomal dysfunction, creating a self-reinforcing cycle that drives disease progression. Using a humanized model, we demonstrate that mitochondrial dysfunction is a key determinant of cardiac phenotype in vivo, driving energetic failure, oxidative stress, and cardiac damage. Importantly, L-arginine treatment restores mitochondrial function and prevents cardiac abnormalities. Our findings define a broadly relevant pathogenic axis linking lysosomal dysfunction, mitophagy failure, and mitochondrial impairment, that lead to impaired energetic metabolism and consequent cardiac hypertrophy, independently from GB3 accumulation. The implications of our study go beyond Fabry disease and support the therapeutic targeting of cellular energy homeostasis to prevent and treat organ damage and failure in chronic diseases.
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    DOI:  https://doi.org/10.64898/2026.04.15.718770
  16. J Clin Invest. 2026 May 01. pii: e202528. [Epub ahead of print]136(9):
      Cardiomyocytes primarily rely on fatty acid oxidation (FAO), which provides more than 70% of their energy. However, excessive FAO can disrupt cardiac metabolism by increasing oxygen demand and suppressing glucose utilization through the Randle cycle. Although inhibition of FAO has been investigated in heart failure, its overall therapeutic impact remains uncertain. To determine the consequences of enhanced FAO, we generated cardiomyocyte-specific ACC1 and ACC2 double-knockout (ACC dHKO) mice, which exhibit constitutively elevated FAO. ACC dHKO mice developed dilated cardiomyopathy and heart failure. Lipidomic analysis revealed marked depletion of cardiolipin caused by reduced linoleic acid, a direct consequence of excessive FAO. This cardiolipin deficiency impaired mitochondrial electron transport chain (ETC) activity, leading to mitochondrial dysfunction. Pharmacologic inhibition of FAO with etomoxir or oxfenicine restored cardiolipin levels, normalized ETC activity, and prevented cardiac dysfunction in ACC dHKO mice. These findings demonstrate that unrestrained FAO disrupts both lipid and energy homeostasis, culminating in heart failure in this model. Collectively, these results indicate that although FAO is essential for cardiac energy production, therapeutic strategies aimed at stimulating cardiac FAO may be detrimental rather than beneficial in heart failure.
    Keywords:  Cardiology; Fatty acid oxidation; Heart failure; Metabolism
    DOI:  https://doi.org/10.1172/JCI202528
  17. Curr Opin Cardiol. 2026 Apr 03.
       PURPOSE OF REVIEW: The nicotinamide adenine dinucleotide (NAD+) is an important redox cofactor that plays a major role in energy metabolism. This review provides an overview of the current understanding of NAD+ in cardiovascular diseases.
    RECENT FINDINGS: Activation of the rate-limiting enzyme nicotinamide phosphoribosyltransferase (NAMPT), a key component of the NAD+ salvage pathway, is emerging as an alternative method to replenish the cycling NAD+ pools and to alleviate the cardiovascular pathophysiology driven by NAD+ depletion. The NAD+-dependent sirtuins play an important role in cellular metabolism and integrate the circadian signaling of clock controlled Nampt oscillation and thereby NAD+ synthesis.
    SUMMARY: An imbalance in the NAD+/NADH ratio caused by NAD+ depletion is implicated in various diseases, including metabolic disease, aging, and cancer. The cellular NAD+ content is decreased in cardiovascular diseases and heart failure. Lack of NAD+ in cardiomyocytes leads to mitochondrial dysfunction, increased reactive oxygen species (ROS) production and cell death. The supplementation of NAD+ and its precursors such as nicotinic acid (NA), nicotinamide (NAM), nicotinamide mononucleotide (NMN), and nicotinamide riboside (NR) are currently being evaluated in clinical trials. This review mainly focuses on the role of NAD+ in cardiovascular diseases and therapeutics.
    Keywords:  cardiovascular diseases; circadian rhythm; metabolism; nicotinamide adenine dinucleotide; nicotinamide phosphoribosyltransferase; therapeutics
    DOI:  https://doi.org/10.1097/HCO.0000000000001292
  18. J Biol Chem. 2026 Apr 27. pii: S0021-9258(26)01970-8. [Epub ahead of print] 113098
      Brain energy metabolism is produced from glucose by mitochondrial oxidative phosphorylation. Variants in the mitochondrial enzyme glycine decarboxylase (GLDC) cause a rare neurological disease, non-ketotic hyperglycinemia (NKH), with expected hallmarks of brain glycine elevation and responsiveness to folate deficiency but the consequences for energy mechanisms remain unknown. We find that brains of young-attenuated mutant mice show a 1.5-fold increase in glycine and no change in folate responsiveness. They are, however, reduced > 5-fold in GLDC, indicate decrease in the mitochondrial lipoyl-transfer protein GCSH and lipoylation of the pyruvate dehydrogenase (PDH) complex as well as rise in signatures of astrocyte mitochondrial β-oxidation of fatty acids proportionate to mutation severity and activation of PDH. Together these data reveal a novel GLDC mechanism that regulates catabolic mitochondrial energy processes in both attenuated and severe brain disease and suggest new targets in energy metabolism to treat NKH.
    DOI:  https://doi.org/10.1016/j.jbc.2026.113098
  19. Mol Cell Biochem. 2026 Apr 27.
      Neurodegenerative diseases, including Alzheimer's disease, Parkinson's disease, Huntington's disease, amyotrophic lateral sclerosis, and multiple sclerosis, remain leading causes of disability and premature death. Although they present with distinct clinical phenotypes, they converge on several pathogenic processes. Among these, mitochondrial dysfunction has emerged as a key driver of neurodegeneration, encompassing impaired bioenergetic capacity, disturbed calcium handling, altered mitochondrial dynamics, insufficient mitophagy, and excessive production of reactive oxygen species (ROS). This review provides a focused synthesis of the ways in which mitochondrial pathology contributes to neurodegeneration across major neurodegenerative disorders and summarizes therapeutic strategies designed to target mitochondria. We outline disease-relevant mitochondrial abnormalities and connect them to neuronal loss, synaptic failure, and neuroinflammatory cascades, with particular attention to mitochondrial ROS and inflammatory signaling linked to mitochondrial DNA. The manuscript further evaluates current and emerging interventions, including mitochondria-targeted antioxidants, mitochondrial transfer/transplantation, exercise, dietary approaches, and nanotechnology-enabled delivery systems. For each strategy, we consider the mechanistic rationale, key preclinical findings, and barriers to translation. Across experimental models, many of these approaches confer measurable neuroprotection-often reflected by lower oxidative burden, stabilization of mitochondrial membrane potential, and partial restoration of ATP production. However, clinical findings have been inconsistent, suggesting that efficacy depends strongly on disease stage, patient heterogeneity, and the specific mitochondrial defect being targeted. By integrating mechanistic insights with therapeutic evidence, this review offers a structured perspective on shared and disease-specific features of mitochondrial dysfunction and highlights priorities for advancing mitochondria-centered interventions toward meaningful clinical benefit.
    Keywords:  Mitochondria; Mitochondrial dysfunction; Neurodegenerative diseases; Oxidative stress
    DOI:  https://doi.org/10.1007/s11010-026-05542-w
  20. J Clin Invest. 2026 Apr 25. pii: e202212. [Epub ahead of print]
      Coenzyme A (CoA) facilitates fatty acid synthesis, energy production, gene regulation, and antioxidant function. While CoA biosynthesis is well-characterized, the mechanisms governing CoA degradation remain poorly understood. Here, we identify the Metazoan Homolog of SpoT, MESH1, as a CoA phosphatase that dephosphorylates CoA at the 3' position of the ribose ring to form dephospho-CoA (dp-CoA). Recent studies have shown that CoA, similar to glutathione (GSH), is a cysteine-derived metabolite that protects cells against ferroptosis. Ferroptosis induced by blocking cystine import depletes CoA biosynthesis, while CoA restoration rescues cells from ferroptosis. We found that MESH1 knockdown preserved CoA levels by preventing its degradation, contributing to ferroptosis protection, indicating the bifunctional role of MESH1 in regulating CoA and previously reported NADPH. Mechanistically, MESH1 knockdown elevates CoA levels, maintaining functional mitochondrial thioredoxin system, thereby preventing mitochondrial lipid peroxidation. In Drosophila, we found that dMesh1 overexpression leads to ferroptosis-mediated muscle atrophy, which can be rescued by increasing CoA and NADPH levels. Taken together, these findings establish MESH1 as a key phosphatase that governs ferroptosis sensitivity by coordinating CoA and NADPH homeostasis, unveiling a novel link between CoA degradation, mitochondrial integrity, and muscle health.
    Keywords:  Amino acid metabolism; Cell biology; Molecular biology; Muscle; Muscle biology
    DOI:  https://doi.org/10.1172/JCI202212
  21. J Vis Exp. 2026 Apr 10.
      Mitochondrial network morphology is widely used as an indicator of cellular health; however, quantifying mitochondrial architecture within intact tissues remains technically challenging. Terminal Schwann cells (tSCs), which are essential for the maintenance and regeneration of neuromuscular junctions, are particularly difficult to analyze in situ due to their anatomical location and sensitivity to tissue disruption. This protocol describes a reproducible approach for labeling and quantifying three-dimensional mitochondrial network morphology in whole-mount skeletal muscle and in tSCs in mice using standard confocal microscopy. The method employs in vivo delivery of a membrane potential-sensitive mitochondrial dye followed by rapid tissue processing and high-resolution confocal imaging. Image stacks are analyzed to quantify mitochondrial network connectivity, area, and fragmentation. The protocol is first validated in dystrophic and healthy skeletal muscle to confirm expected differences in mitochondrial morphology and is subsequently adapted to visualize and quantify mitochondrial networks in tSCs identified using S100β reporter mice. This approach enables the analysis of mitochondrial morphology within intact neuromuscular tissues without requiring transgenic mitochondrial reporters or specialized imaging platforms. The protocol requires only equipment commonly available in university core facilities and can be adapted to other thin or superficially accessible tissues.
    DOI:  https://doi.org/10.3791/69732
  22. Mol Ther. 2026 Apr 24. pii: S1525-0016(26)00309-6. [Epub ahead of print]
      Preclinical gene therapy studies of mitochondrial diseases remain limited due to the typically multiorgan manifestations and the scarcity of physiologically relevant animal models. Mutations in BCS1L, a nuclear gene encoding an assembly factor for mitochondrial complex III (CIII), are the most common cause of CIII deficiency. The most severe phenotype, GRACILE syndrome, is caused by a homozygous Finnish founder mutation (c.A232G, p.S78G). The corresponding Bcs1lp.S78G knock-in mouse model recapitulates the human disease, with juvenile-onset hepatopathy, tubulopathy, growth restriction, segmental progeria, and short survival. Here, we performed liver-targeted recombinant adeno-associated virus (rAAV)-mediated gene replacement in this model. A single intraperitoneal injection of rAAVs encoding wild-type Bcs1l restored CIII assembly and activity in the liver, preventing hepatopathy. Hepatocyte-specific correction was sufficient to alleviate hypoglycemia, improve growth, normalize systemic metabolism, and extend survival by nearly two-fold, despite persistent CIII deficiency in other tissues. Remarkably, restoring CIII activity in the liver robustly corrected the skeletal muscle transcriptomic changes, particularly those linked to altered energy substrate utilization. These results underscore the central role of the liver in systemic energy homeostasis and growth regulation in multiorgan mitochondrial diseases and demonstrate the therapeutic potential of hepatocyte-directed gene replacement in phenotypes with prominent hepatopathy.
    DOI:  https://doi.org/10.1016/j.ymthe.2026.04.044
  23. Neurobiol Dis. 2026 Apr 24. pii: S0969-9961(26)00157-9. [Epub ahead of print]224 107412
      Mitochondrial DNA (mtDNA) has received increasing attention in amyotrophic lateral sclerosis (ALS) following the recent report of recurrent low-heteroplasmy mtDNA variants in patients. Here, we performed mtDNA analysis on an independent cohort of 20 sporadic ALS patients using an in-house next-generation sequencing pipeline designed for diagnostics. Using standard filters, none of the previously reported low-heteroplasmy mtDNA variants were detected. These variants only appeared in the low-quality data and were present at similar rates in a large reference population without ALS, localizing to homopolymeric regions that are prone to sequencing errors. Our findings suggest that these low-level mtDNA variants are a result of the technical limitations of short-read next-generation sequencing rather than being associated with the disease.
    Keywords:  Amyotrophic lateral sclerosis; Mitochondria; Mitochondrial DNA
    DOI:  https://doi.org/10.1016/j.nbd.2026.107412
  24. J Clin Invest. 2026 May 01. pii: e204459. [Epub ahead of print]136(9):
      Fatty acid oxidation (FAO) provides the healthy heart with 60%-90% of its ATP, with the remainder coming from metabolism of glucose. Metabolic flexibility is key to heart function, ensuring an uninterrupted source of fuel. In heart failure, a shift from FAO to glucose-dependent metabolism occurs as disease progresses, supporting the widely held notion that fat is the optimal substrate in the heart. In this issue of the JCI, Kim et al. challenge this assumption. In studies of acetyl-CoA carboxylase-deficient (ACC-deficient) mice, they found that unregulated use of fat as a substrate led to cardiac damage. ACC-deficient mice developed cardiolipin deficiency as a result of excessive FAO depleting stores of linoleic acid, which is used as a substrate for cardiolipin maturation. The resulting mitochondrial dysfunction was associated with dilated cardiomyopathy and heart failure in these mice. The findings highlight potential for development of therapeutic strategies that balance energy sources and replenish cardiolipin levels.
    DOI:  https://doi.org/10.1172/JCI204459
  25. Biol Cell. 2026 May;118(5): e70066
      Mitochondria exhibit a complex spatially organized distribution within muscle, tailored to the energy requirements of ATPases and contractile filaments, which exhibit precise intracellular positioning. Mitochondrial distribution varies across longitudinal and transverse axes as well as based on fiber composition within the muscle. The differential mitochondrial capacity can be localized in muscle by succinate dehydrogenase (SDH) activity. Given the distinct energy requirements of the fore-limb and hind-limb muscles, this study aimed to investigate the distribution of mitochondrial activity within individual fibers and their composition within fascicles across different tetrapod taxa. We analyzed pectoralis and gastrocnemius from toad, garden lizard, duck, pigeon, quail, chicken, rat, rabbit, goat, and buffalo. The study revealed unique patterns of mitochondrial activity distribution within the same muscle across various tetrapods. Toad and lizard muscles showed mostly fibers with intermediate SDH-activity (SDHInt) in both muscles. The muscles only from birds and mammals exhibited fibers with negligible SDH-activity termed SDHLow, which might indicate that such fibers are evolutionarily more recent. Interestingly, avian pectoralis showed a very unique fiber composition compared to mammals, which displayed a mosaic pattern of different fibers. Among mammals, slow-grazers (buffaloes, goats) had higher percentages of SDHHigh and SDHInt fibers, whereas sprint-runners (rats, rabbits) possessed a high abundance of SDHLow fibers. These findings provide evidence for localized mitochondrial enrichment as an adaptation strategy to create muscle group heterogeneity. SUMMARY STATEMENT: This study characterizes the spatial distribution of mitochondrial activity in skeletal muscle across tetrapods, from the single-fiber scale to the fascicular level.
    Keywords:  fiber type; metabolism; mitochondria; skeletal muscle; succinate dehydrogenase; tetrapods
    DOI:  https://doi.org/10.1111/boc.70066
  26. EMBO Rep. 2026 Apr 27.
      Mitochondrial and lysosomal abnormalities co-occur in aging-related diseases with progressive tissue atrophy. It remains unclear whether these two pathogenic pathways affect tissue homeostasis independently, convergently or epistatically. We show that mitochondrial protein import stress causes vacuolar damage in yeast, manifested by V-ATPase disassembly, and vacuolar deacidification and fragmentation. In a mouse model of mitochondrial protein import stress induced by overloading of the nuclear-encoded ANT1 protein, we observe progressive muscle atrophy independent of bioenergetic defects. Like in yeast mutants with severe vacuolar damage, genes involved in amino acid uptake/biosynthesis, one-carbon metabolism, lysosomal biogenesis and iron homeostasis are activated in the skeletal muscle of Ant1-transgenic mice. The affected muscles accumulate glycogen, lipofuscin and poorly processed multivesicular bodies. Despite activation of lysosomal repair and lysophagic pathways, autophagic flux is severely stalled. During aging, various proteolytic cathepsins are increasingly released from the lysosomal lumen into the cytosol. Together with proteasomal activation, this may contribute to unbalanced proteostasis, reduced myofiber size and skeletal muscle atrophy. Our study therefore discovered an evolutionarily conserved mitochondria-to-lysosome proteotoxic axis that affects tissue mass homeostasis during aging.
    DOI:  https://doi.org/10.1038/s44319-026-00774-9
  27. JACC Basic Transl Sci. 2026 Apr 24. pii: S2452-302X(26)00062-8. [Epub ahead of print]11(5): 101544
      Increased oxygen levels at birth regulate myocyte bioenergetic and structural maturation controlled by mitochondrial cyclophilin D (CypD). We evaluated mechanisms of neonatal hypoxic cardiac dysfunction by exposing neonatal mice to 12% oxygen and studied cardiac bioenergetics, myocyte maturation, and function. Hypoxia decreased the activity/assembly of electron transport chain complex I, uncoupled oxidative phosphorylation, increased proliferation, decreased differentiation, increased ventricular mass, and decreased cardiac function. CypD inhibition rescued most hypoxia-mediated effects and increased cardiac function. In conclusion, neonatal hypoxia alters cardiac bioenergetics, myocyte maturation, and cardiac function through CypD-dependent pathways, providing potential therapeutic targets for neonatal cardiac dysfunction.
    Keywords:  NIM811; cardiac development; cardiomyocyte maturation; cyclosporin A; mitochondria
    DOI:  https://doi.org/10.1016/j.jacbts.2026.101544
  28. Research (Wash D C). 2026 ;9 1042
      Impaired mitophagy and the accumulation of damaged mitochondria are key drivers of endothelial cell (EC) dysfunction in diabetic wounds. While mitochondrial transplantation (MT) has demonstrated therapeutic potential in such mitochondrial damage-related diseases, its application is still thwarted by elusive mechanisms and practical hurdles such as poor targeting specificity and low delivery efficiency. Here, we reveal that MT acts by reactivating mitophagy to selectively eliminate dysfunctional mitochondria, thereby restoring mitochondrial homeostasis and rescuing EC functionality. To exploit this discovery, we engineer a biomimetic MT strategy through coating EC-derived apoptotic vesicle membrane (AVM) onto the surface of isolated mitochondria. The resulting mitochondria-AVM complex (Mito-AVM) leverages homologous targeting and phosphatidylserine-mediated "eat-me" signaling, achieving a remarkable 150% increase in delivery efficiency to ECs in diabetic wounds. Furthermore, we construct a 3-aminophenylboric acid-modified hyaluronic acid/polyvinyl alcohol hydrogel for the diabetic wound microenvironment, enabling reactive oxygen species/glucose-triggered sustained release of encapsulated Mito-AVM at the wound site. In summary, our work elucidates a fundamental mechanism of MT and provides an efficient and targeted strategy for MT therapy, offering fresh perspectives for diabetic wound treatment.
    DOI:  https://doi.org/10.34133/research.1042
  29. bioRxiv. 2026 Apr 17. pii: 2026.04.14.718012. [Epub ahead of print]
      Cardiolipin (CL) is a four-chained, mitochondrial-specific phospholipid crucial for maintenance of inner mitochondrial membrane (IMM) structure and function. In healthy tissues, CL acyl chains are highly unsaturated and maintained by a conserved remodeling pathway. However, dysregulation of CL acyl chain composition can arise from mutations in the CL transacylase, Tafazzin (TAZ), resulting in Barth syndrome (BTHS), where patients exhibit heightened mitochondrial dysfunction. Cells lacking TAZ accumulate three-chained monolysocardiolipin (MLCL) as well as CL species with saturated acyl chains (CLsat). While the presence of MLCL destabilizes electron transport chain (ETC) complexes and IMM-shaping proteins, the contributions of CLsat to mitochondrial dysfunction have not been elucidated. Here, we find that treatment of TAZ knockout cells with exogenous saturated fatty acids causes accumulation of CLsat and loss of mitochondrial inner membrane structure despite only minimal changes in MLCL composition. Imaging of cells with elevated CLsat showed reduced fluidity of the inner membrane. Biophysical measurements and molecular dynamics analyses showed that di-saturated (C16:0 18:1)2 CL species order and rigidify membranes, while also losing the intrinsic lipid curvature characteristic of tetra-unsaturated CL. These results implicate CLsat as a potential driver of mitochondrial dysfunction and an additional therapeutic target in mitigating BTHS pathology.
    DOI:  https://doi.org/10.64898/2026.04.14.718012
  30. FEBS J. 2026 Apr 29.
      Dynamin-related protein 1 (Drp1), encoded by DNM1L, is essential for mitochondrial fission, but its functional roles remain unclear due to isoform-specific effects from alternative splicing. Short-read RNA sequencing fails to resolve full-length isoforms involving distant exons, limiting our understanding. Here, we applied targeted long-read sequencing to profile full-length DNM1L transcripts in human left ventricle and induced pluripotent stem cell-derived cardiomyocytes, recovering all annotated isoforms with conserved expression patterns and isoforms 1-4 being the most abundant. Functional assays revealed that isoform abundance does not predict enzymatic activity. Extending this to six different mouse tissues, we identified distinct, tissue-enriched expression profiles. Functional rescue in Drp1-knockout mouse embryonic fibroblasts showed isoform-dependent differences in mitochondrial fission. Isoforms lacking the A-insert robustly rescued mitochondrial fission, with maximal activity observed for variants also lacking the B-insert (e.g. isoform b), consistent with a modulatory role of exon 3 in Drp1 activity. Our cross-species atlas integrates long-read transcriptomics with functional validation, revealing how isoform diversity underpins tissue-specific mitochondrial dynamics and physiological roles of Drp1.
    Keywords:  DNM1L; Drp1; cardiomyocytes; isoforms; left ventricle; mitochondrial dynamics
    DOI:  https://doi.org/10.1111/febs.70568
  31. Clin Genet. 2026 May 01.
      Hereditary optic neuropathies comprise a genetically heterogeneous group of disorders caused by pathogenic variants in mitochondrial and nuclear genes. Despite increasing diagnostic yields, many patients remain without a molecular diagnosis. We report a novel candidate heterozygous variant in the PHB1 (Prohibitin 1) gene in a large family affected by autosomal dominant optic atrophy. A three-generation family with slowly progressive visual acuity loss due to optic neuropathy and an apparent autosomal dominant pattern was clinically characterized and recruited for genetic counseling. Exome sequencing and genome-based linkage mapping were performed, alongside protein modeling and in vitro experiments to obtain functional evidence. Family-based whole-genome linkage mapping identified a heterozygous missense variant, c.440C>T (p.Ser147Phe), in PHB1 in all five affected individuals. The variant substitutes p.Ser147Phe within an evolutionarily conserved alpha-helix domain of PHB1, a mitochondrial protein with multiple roles. In silico modeling suggested that p.Ser147Phe may disrupt PHB1 stability and function through loss of hydrogen bonding, steric hindrance, and altered hydrophobic interactions. In vitro experiments suggested potential alterations in mitochondrial dynamics in variant carriers, including a changed ratio of L-OPA1 to S-OPA1 compared with non-carriers. We present initial evidence that PHB1 is a novel candidate gene potentially associated with dominant optic atrophy or a related mitochondrial disorder. This represents the first report implicating PHB1 in a Mendelian disease. Further studies are required to validate this association.
    DOI:  https://doi.org/10.1111/cge.70174
  32. Methods Cell Biol. 2026 ;pii: S0091-679X(26)00095-6. [Epub ahead of print]206 23-42
      Apoptosis, a tightly regulated form of programmed cell death, eliminates damaged or malignant cells and is triggered by internal or external stress signals. A critical decision point is mitochondrial outer membrane permeabilization (MOMP), governed by BCL-2 family proteins. Pro-apoptotic members such as BAX and BAK form pores in the mitochondrial outer membrane, releasing intermembrane space proteins like cytochrome c into the cytoplasm. Once cytosolic, cytochrome c binds APAF-1 to form the apoptosome, which activates caspase-9 and subsequently caspase-3, driving apoptosis through cleavage of key cellular substrates. Cytochrome c release serves as a hallmark and point of no return in the apoptotic cascade. However, cytochrome c release can be variable, occurring at submaximal levels or from only a subset of mitochondria, which complicates detection in heterogeneous cell populations. To address this, we developed a semi-automated imaging-based method to quantify cytochrome c release at the single-cell level using immunofluorescence microscopy. Our approach uses CellProfiler, an open-source image analysis platform, to implement a pipeline that segments adherent cells into nuclear, mitochondrial, and cytoplasmic compartments based on compartment-specific reference stains. The pipeline quantifies cytochrome c distribution across these compartments, calculating the ratio of mitochondrially retained to cytoplasmic cytochrome c for each cell. Automation of segmentation and measurement ensures rapid, robust, and reproducible analysis, with only image acquisition and data interpretation performed manually. This method provides a quantitative readout of MOMP and can be readily adapted to any immunofluorescence-detectable protein given an appropriate compartmental marker, expanding its utility for broader cellular studies.
    Keywords:  Apoptosis; Cell segmentation; CellProfiler; Cytochrome c release; Immunofluorescene staining; MOMP; Semi-automated quantification
    DOI:  https://doi.org/10.1016/bs.mcb.2026.03.002
  33. Nature. 2026 May 01.
      
    Keywords:  Cell biology; Evolution; Palaeontology; Zoology
    DOI:  https://doi.org/10.1038/d41586-026-01439-2
  34. Biomaterials. 2026 Apr 27. pii: S0142-9612(26)00276-0. [Epub ahead of print]334 124252
      Mitochondrial dysfunction plays a critical role in glaucomatous trabecular meshwork (TM) degeneration, whereas increasing intracellular nicotinamide adenine dinucleotide (NAD+) levels can restore mitochondrial homeostasis, offering therapeutic benefits for glaucoma. We propose that intracellular NAD+ can be boosted by promoting NAD+ biosynthesis through the co-delivery of nicotinamide (NAM), an NAD+ precursor, and the gene encoding nicotinamide mononucleotide adenylyltransferase 1 (Nmnat1), the rate-limiting enzyme for NAD+ biosynthesis that consumes NAM. To achieve high gene transfection efficiency, the Nmnat1 gene was encapsulated in a multifunctional lipid nanoparticle (Nmnat1-LNPs). The combination of Nmnat1-LNPs and NAM synergistically reversed mitochondrial dysfunction in primary human trabecular meshwork cells (HTMCs) model. We then developed a new annular sector-shaped microneedle patch (AS-MNs), enabling localized delivery of Nmnat1-LNPs and NAM to the TM. Following application, Nmnat1-LNPs and NAM dual-loaded AS-MNs (Dual@AS-MNs) significantly enhanced the bioavailability of both the Nmnat1 gene and NAM in the TM tissue, leading to a marked reduction in intraocular pressure and alleviation of TM fibrosis in a dexamethasone-induced mice model of glaucoma, highlighting its therapeutic potential. This study presents the first development of an annular sector-shaped microneedle patch as a targeted TM drug delivery platform, and offers a promising new combinatorial strategy for glaucoma treatment.
    Keywords:  Gene delivery; Glaucoma; Microneedle; Mitochondrial therapy; Nicotinamide
    DOI:  https://doi.org/10.1016/j.biomaterials.2026.124252
  35. Am J Med Genet A. 2026 Apr 27.
      Multiple Acyl-CoA Dehydrogenase Deficiency (MADD) is an autosomal recessive inborn error of metabolism caused by biallelic pathogenic variants in one of three known genes: ETFA, ETFB, and ETFDH. It can cause multisystem dysfunction, including cardiomyopathy in severe cases. Ketone supplementation has been reported to be beneficial in a few case reports, but its long-term effectiveness remains unclear. We report an infant with a clinical and biochemical diagnosis of MADD who showed a favorable response to ketone supplementation, with marked improvement in severe cardiac dysfunction and sustained near-normal cardiac function and biochemical profiles over 3.5 years. Although genome sequencing did not identify causative variants, RNA sequencing revealed reduced ETFB transcript levels, and western blot analysis showed decreased ETFB protein levels. This case report illustrates MADD without an identified molecular diagnosis and provides evidence that near-absent ETFB expression is likely responsible for his presentation. These observations can guide further studies investigating the transcriptional regulation of ETFB, thereby elucidating an underappreciated molecular mechanism underlying MADD. Initiating metabolic therapy in patients with clinically suspected MADD, even in the absence of a confirmed molecular diagnosis, can be beneficial as suggested by the clinical and biochemical responses to our therapeutic trial.
    Keywords:  DNA sequencing; RNA sequencing; ketone supplementation; multiple acyl‐CoA dehydrogenase deficiency (MADD); protein analysis
    DOI:  https://doi.org/10.1002/ajmg.a.70177
  36. Am J Med Genet A. 2026 Apr 27.
      Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency (LCHADD) is an autosomal recessive mitochondrial defect of long-chain fatty acid β-oxidation, caused by biallelic pathogenic variants in HADHA or HADHB. We report a 22-year-old male with an atypically mild presentation of LCHADD who was referred to the Undiagnosed Diseases Network (UDN). Trio genome sequencing identified a maternally inherited HADHA frameshift pathogenic variant and a paternally inherited noncoding rare HADHA variant. The paternal noncoding variant was predicted by in silico splicing analysis to create a cryptic splice donor site. This was experimentally confirmed to partially perturb splicing, leading to partial disruption of normal splicing and the production of both normal and aberrant transcripts. Transcripts derived from the cryptic donor site were subject to nonsense-mediated decay (NMD). As a result, the proband's cells produced three HADHA transcripts: a truncated maternal transcript that was destroyed by NMD, an abnormally spliced paternal transcript also subject to NMD, and a normally spliced paternal transcript. The presence of residual normally spliced HADHA transcripts from the paternal allele likely contributes to partial preservation of LCHAD enzyme function and provides a plausible explanation for the proband's attenuated clinical phenotype.
    Keywords:   HADHA ; NMD; cryptic splice donor; diagnostic odyssey; genome sequencing; long‐chain 3‐hydroxyacyl‐CoA dehydrogenase deficiency; nonsense‐mediated decay
    DOI:  https://doi.org/10.1002/ajmg.a.70172
  37. bioRxiv. 2026 Mar 18. pii: 2026.03.16.711480. [Epub ahead of print]
      Functional genomics studies have provided critical insights into cell type-specific gene regulatory programs, but to date most have been conducted in wild-type tissues or cell cultures. Here, we present a gene expression functional atlas across the mouse brain. We use an enhanced in vivo Perturb-seq platform to analyze transcriptome-wide responses to loss of 1,947 disease-associated genes, profiling over 7.7 million cells spanning major brain regions and neuronal populations. We find striking cell-type-specific essentiality and transcriptional programs and show that closely related disease genes such as two NMDA receptor subunits can drive opposing transcriptional programs. Together, this work reveals insights into the genetics and mechanisms of neurodevelopmental, psychiatric, and neurodegenerative diseases in vivo, paving the way for the design of future genetic medicine.
    DOI:  https://doi.org/10.64898/2026.03.16.711480
  38. bioRxiv. 2026 Apr 13. pii: 2024.05.13.593915. [Epub ahead of print]
      Tissues store nutrients as triglyceride (TG) or glycogen at specific ratios, but how these reserves are sensed and balanced remains poorly understood. Here we show that blockage of de novo lipogenesis (DNL) in the Drosophila fat body (FB) triggers a cell autonomous metabolic switch characterized by severe fat depletion and profound glycogen accumulation that supports animal development. Despite lipid loss, Drosophila develop normally but exhibit shortened lifespans and impaired female fecundity. Mechanistically, we identify SREBP-dependent metabolic rewiring that facilitates a switch from TG to glycogen storage, triggered by fatty acid deficiency when DNL is inhibited, and which is rescued by dietary fatty acids. Fat depleted FBs require glycolysis but exhibit blunted mitochondrial metabolism, and no dependence on lactate utilization. Finally, we identify histone acetyltransferases (HATs) Nej and Tip60, which support SREBP activity, as essential for this metabolic switch. Collectively, we propose that in response to DNL deficiency, the fat-depleted FB undergoes a SREBP-mediated TG-to-glycogen metabolic switch preserving organismal development at the cost of reproductive success.
    Key findings: Fat body-specific FASN1 loss leads to fat-depleted but viable Drosophila that complete their developmental lifecycle by rewiring energy metabolism to store glycogen instead of fat FASN1-deficient larvae functionally rely on glycogen synthesis and glycolysis, but not lactate metabolism, and display blunted TCA metabolismMetabolic screening reveals a SREBP-dependent TG:glycogen metabolic switch in response to blockage of DNL fatty acid biosynthesisHistone acetyltransferases (HATs) Nej and Tip60, and acetyl-CoA synthase, are required for the TG:glycogen metabolic switch.
    DOI:  https://doi.org/10.1101/2024.05.13.593915
  39. NPJ Dement. 2026 ;2(1): 25
      Single large-scale mitochondrial DNA deletions (SLSMDs) are among the most common mitochondrial disorders. Adult-onset rapidly progressive dementia (RPD) due to an SLSMD has not previously been described. A 35-year-old male was referred to our clinic for assessment of RPD after developing rapidly progressive cognitive, behavioral, and motor symptoms over 14 months. Serial brain MRIs demonstrated progressive severe left temporal, moderate right temporal, and mild global brain parenchymal atrophy without T2-weighted or diffusion-weighted MRI abnormalities. Blood and cerebrospinal fluid testing showed elevated nonspecific markers of neurodegeneration (neurofilament light chain, 14-3-3γ, and neuron-specific enolase). After excluding common etiologies of RPD, mitochondrial genome sequencing revealed a novel de novo SLSMD (m.608_14511del). Brain magnetic resonance spectroscopy of the left thalamus demonstrated spectra suggestive of a lactate peak. This case demonstrates that SLSMDs can present with RPD as the primary clinical manifestation and should be considered in the differential diagnosis of RPD in young adults.
    Keywords:  Diseases; Neurology; Neuroscience
    DOI:  https://doi.org/10.1038/s44400-026-00081-z
  40. Nat Metab. 2026 Apr 29.
      Stable isotope-tracing assays track few metabolites, yet cells use many nutrients to sustain nitrogen metabolism. Here we create a platform for tracing 30 nitrogen isotope-labelled metabolites in parallel to enable a system-level understanding of cellular nitrogen metabolism. This platform reveals that while primitive cells engage both de novo and salvage pyrimidine synthesis pathways, differentiated cells nearly exclusively salvage uridine. This link between cell state and pyrimidine synthesis pathway preference persists in murine and human tissues. Mechanistically, we find that S1900 phosphorylation of CAD, the first enzyme of the de novo pathway, is induced by uridine deprivation in differentiated cells and constitutively enriched in primitive cells. Mimicking CAD S1900 phosphorylation in differentiated cells constitutively activates de novo pyrimidine synthesis, while blocking this modification impairs the cellular response to uridine starvation. Collectively, we establish a method for nitrogen metabolism profiling and define a mechanism of cell state-specific pyrimidine synthesis pathway choice.
    DOI:  https://doi.org/10.1038/s42255-026-01520-0
  41. Neurochem Int. 2026 Apr 24. pii: S0197-0186(26)00055-0. [Epub ahead of print] 106164
      Mitochondrial dynamics have been increasingly recognized as a central determinant in the pathogenesis of central nervous system (CNS) disorders. Mitofusin 2 (MFN2), a critical mitochondrial fusion protein, preserves mitochondrial network integrity and participates in fission, mitophagy, and axonal transport, thereby maintaining neuronal function and energy homeostasis. Structural features of MFN2 underpin its diverse regulatory roles, whereas MFN2 deficiency leads to mitochondrial fragmentation, metabolic dysfunction, oxidative stress, and neuronal impairment. This review summarizes the molecular mechanisms of MFN2 in the CNS and its impact on neuronal survival, synaptic function, and signaling pathways. In addition, we highlight potential MFN2-targeted interventions, including natural compounds, pharmacological agents, and emerging small-molecule activators, while also discussing disease-specific mechanisms and translational challenges such as endoplasmic reticulum (ER)-mitochondria communication abnormalities and blood-brain barrier permeability.
    Keywords:  Central nervous system disorders; MFN2 activators; Mitochondrial dynamics; Mitofusin 2
    DOI:  https://doi.org/10.1016/j.neuint.2026.106164
  42. iScience. 2026 May 15. 29(5): 115627
      POSH (plenty of SH3 domains), an autism-linked scaffold protein, is essential for N-methyl-D-aspartate receptor (NMDAR) complex assembly, and its loss causes ASD-like social deficits in mice. However, the synaptic mechanism remains unclear. Here, we reveal that POSH loss reduces SRC postsynaptic enrichment and weakens the interactions within the SRC-NMDAR-PSD-95 complex. Mechanistically, NMDAR activation triggers RAC1-GTP-dependent recruitment of POSH to membrane, leading NMDAR-induced activation of SRC, a key positive regulator of NMDARs. Notably, prolonged NMDAR activation induces the depletion of both POSH and SRC, establishing a negative feedback loop. This dual spatiotemporal mechanism-transient kinase activation coupled with scaffold degradation-constitutes a self-limiting circuit that prevents NMDAR hyperexcitation. Our findings establish POSH as a molecular rheostat that integrates RAC1-driven membrane targeting with SRC activation to precisely regulate NMDAR signaling. These insights would advance our understanding of synaptic homeostasis and may inform potential therapeutic strategies for ASD and glutamatergic disorders.
    Keywords:  biochemistry; cell biology; neuroscience
    DOI:  https://doi.org/10.1016/j.isci.2026.115627
  43. STAR Protoc. 2026 Apr 25. pii: S2666-1667(26)00173-5. [Epub ahead of print]7(2): 104520
      Primary mature human adipocytes are an important tool bridging basic research and clinical medicine by reflecting human biological diversity. Here, we present a protocol for measuring the oxygen consumption rate of mature adipocytes. We describe the steps for isolation of adipocytes from adipose tissue samples, Matrigel embedding, and Seahorse analysis, as well as normalization and data analysis. This protocol enables the investigation of the metabolic function of primary mature human adipocytes in response to drugs or genetic modifications.
    Keywords:  Cell Biology; Cell culture; Cell isolation; Metabolism
    DOI:  https://doi.org/10.1016/j.xpro.2026.104520
  44. bioRxiv. 2026 Apr 14. pii: 2026.04.10.717554. [Epub ahead of print]
      Alzheimer's disease (AD) is characterized by diminished capacity to mount adaptive cellular stress responses required to maintain energy homeostasis and proteostasis. An emerging therapeutic strategy is to restore adaptive stress responses by inducing mild energetic stress through inhibition of mitochondrial complex I (mtCI). However, pharmacological inhibition of the respiratory chain has remained challenging, as it can induce bioenergetic failure rather than beneficial signaling. Here, we describe C273, a brain-penetrant small molecule that delivers controlled, weak attenuation of mtCI activity to therapeutically restore endogenous adaptive stress pathways. This work establishes a first-in-class mechanism in which calibrated activation of multifaceted adaptive mechanisms enhances cellular resilience, rather than impairing mitochondrial function. Structure-activity relationship optimization yielded a compound with high potency against Aβ-induced cellular toxicity, strong selectivity for mtCI, and favorable drug-like properties. C273 demonstrated excellent oral bioavailability, metabolic stability in mouse, rat, and human microsomes, minimal CYP liabilities, and a clean ancillary pharmacology profile in the Eurofins CEREP44 panel. In vivo , C273 readily crosses the blood-brain barrier and activates AMP-activated protein kinase (AMPK), initiating a coordinated hormetic response characterized by enhanced antioxidant defenses, suppression of inflammatory signaling, induction of autophagy, and increased mitochondrial biogenesis and turnover. Genetic deletion of AMPKα1/α2 abolished these responses, establishing AMPK as a critical mediator of C273 activity. Pharmacological competition experiments further confirmed the target, as pretreatment with non-toxic concentrations of rotenone blocked C273 interaction with the quinone-binding site of mtCI and eliminated its neuroprotective effects. Repeated oral administration of C273 (20-80 mg/kg/day) to wild-type mice for one month produced no detectable cardiac or hepatic toxicity, indicating a favorable in vivo safety margin. Importantly, C273 activated these mechanisms and reduced Aβ and p-Tau levels in induced pluripotent stem cell-derived cerebral organoids from patients with sporadic AD. Collectively, these results establish controlled mtCI modulation as a therapeutic strategy and position C273 as a promising disease-modifying candidate for AD.
    DOI:  https://doi.org/10.64898/2026.04.10.717554
  45. Commun Biol. 2026 Apr 30.
      The liver is the largest metabolic organ in the human body, performing functions as metabolism, secretion, immunity, and detoxification. Due to the high energy demand, liver cells are rich in mitochondria. Mitochondrial homeostasis is crucial for liver development and function, yet the molecular pathways linking mitochondrial dysfunction to liver defects remain incompletely understood. In this study, using the zebrafish model, we show that loss of Mrpl13, a component of the mitochondrial ribosomal subunit, results in pronounced abnormalities in liver development. The deficiency of Mrpl13 disrupts mitochondrial homeostasis, as evidenced by fragmentated mitochondria, impaired energy metabolism, excessive reactive oxygen species, and lipid accumulation in liver cells. Notably, loss of Mrpl13 triggers mTORC1 signaling, and treatment with the mTORC1 inhibitor rapamycin significantly alleviates liver developmental defects, suggesting that mTORC1 signaling mediates the role of Mrpl13 in regulating mitochondrial homeostasis and liver development. Overall, our findings reveal a regulatory axis involving Mrpl13, mTORC1, and mitochondrial homeostasis during liver development, providing a theoretical basis for exploring therapeutic strategies for liver defects associated with mitochondrial dysfunction.
    DOI:  https://doi.org/10.1038/s42003-026-10137-8
  46. J Child Neurol. 2026 Apr 25. 8830738261441098
      
    Keywords:  MELAS; hemichorea; stroke-like episode
    DOI:  https://doi.org/10.1177/08830738261441098
  47. J Microbiol Methods. 2026 Apr 29. pii: S0167-7012(26)00135-1. [Epub ahead of print] 107523
      The fission yeast Schizosaccharomyces pombe (S. pombe) serves as an important model organism for investigating mitochondrial function and gene regulation. However, obtaining sufficient quantity and high-quality mitochondrial RNA (mtRNA) for techniques like Northern blot analysis remains challenging, particularly from stationary-phase cells with rigid cell walls. We developed an improved extraction method by comparing conventional hot-phenol and commercial column-based approaches with modified Enzymatic-Phenol/Chloroform (EPC) protocol, which replaces harsh thermal/liquid nitrogen steps with gentle enzymatic lysis. Additionally, for hard-to-lyse stationary-phase cells, we introduced a specialized OM Buffer to enhance efficiency. The refined EPC protocol achieved substantially higher mtRNA yields without compromising RNA purity. Northern blot analysis confirmed successful isolation of mtRNAs, revealing strong, well-defined signals for mtRNA. This protocol provides a reliable tool for advanced mitochondrial research in S. pombe and other eukaryotes.
    Keywords:  Mitochondrial RNA extraction; Northern blot; Schizosaccharomyces pombe; Stationary phase
    DOI:  https://doi.org/10.1016/j.mimet.2026.107523
  48. Cell Death Dis. 2026 Apr 25.
      Mitochondrial cristae are intricately folded structures of the inner mitochondrial membrane that play essential roles in cellular energy production, metabolic regulation, and compartmentalization. Far from being passive folds, cristae are dynamic, functional entities central to mitochondrial bioenergetics. Their architecture maximizes membrane surface area and spatially organizes protein complexes to enhance oxidative phosphorylation and adenosine triphosphate (ATP) synthesis. The compartmentalized structure of cristae also establishes functional barriers that help maintain localized proton gradients, optimize metabolic reactions, and contribute to mitochondrial stability. These dual roles in energy transformation and spatial segregation underscore the importance of the cristae in supporting cellular homeostasis. The structural design and lipid composition of cristae with enrichment in cardiolipin also reflect their bacterial ancestry, revealing an evolutionary continuity from prokaryotic bioenergetic systems to eukaryotic organelles. Moreover, dynamic remodeling of cristae in response to stress, nutrient availability, and developmental cues highlights their adaptability in regulating mitochondrial performance and signaling pathways. Disruption of cristae architecture is increasingly implicated in neurodegenerative, cardiovascular, and metabolic diseases due to impaired ATP synthesis and compromised mitochondrial integrity. This review examines emerging insights into the organization, composition, and regulatory mechanisms of the cristae, emphasizing their role as both bioenergetic engines and protective compartments. Understanding the complex interplay between cristae structure and mitochondrial function may illuminate novel strategies for restoring mitochondrial health and targeting diseases linked to mitochondrial dysfunction. Cristae represent an evolutionary innovation that bridges structure and function, enabling the mitochondria to meet the multifaceted demands of the eukaryotic cell.
    DOI:  https://doi.org/10.1038/s41419-026-08779-x
  49. STAR Protoc. 2026 Apr 28. pii: S2666-1667(26)00185-1. [Epub ahead of print]7(2): 104532
      Here, we present a protocol for a feeder-free culture system for canine induced pluripotent stem cells (ciPSCs) using a recently developed medium, termed AR medium, on extracellular matrix (ECM)-coated dishes. We describe steps for thawing frozen ciPSC stocks, medium exchange, passaging, and cryopreservation. This technique enables stable colony formation, high viability, and consistent proliferation of ciPSCs during long-term maintenance. It provides a reproducible platform for downstream applications of ciPSCs, such as cell differentiation, gene editing, and disease modeling. For complete details on the use and execution of this protocol, please refer to Nishimura et al.1.
    Keywords:  Cell Biology; Developmental biology; Stem Cells
    DOI:  https://doi.org/10.1016/j.xpro.2026.104532
  50. STAR Protoc. 2026 Apr 24. pii: S2666-1667(26)00171-1. [Epub ahead of print]7(2): 104518
      Genetically engineered human induced pluripotent stem cells (hiPSCs) are vital for disease modeling and drug discovery, yet generating clonal lines efficiently post-editing remains challenging. Here, we present a protocol to generate clonal hiPSC lines after gene editing using either electrostatic droplet- or microfluidics-based sorting platforms. We describe steps for culturing hiPSCs, CRISPR-RNP electroporation, single-cell sorting, and expansion of gene-edited clones. Using this protocol, we generated over 100 clonal lines across seven knock-in/knock-out experiments, demonstrating broad utility and reproducibility. For additional details on the use and execution of this protocol, please refer to Patel et al.1.
    Keywords:  Biotechnology and bioengineering; CRISPR; Stem Cells
    DOI:  https://doi.org/10.1016/j.xpro.2026.104518
  51. iScience. 2026 May 15. 29(5): 115569
      Pluripotent stem cells (PSCs) exist in either a "primed" state or a "naive" state. While several protocols are available to convert primed human PSCs (hPSCs) to the naive-state hPSCs, they often require multiple exogenous factors. Here, we show that the activation of AMP-activated protein kinase (AMPK) or its downstream p38 alone induces naive conversion. Primed hPSCs cultured with activated AMPK-p38 displayed key naive features, including naive marker expression, three-germ-layer differentiation, epigenomic resetting, and increased mitochondrial activity. An AMPK activator-5-aminoimidazole-4-carboxamide-1-β-D-ribofuranoside (AICAR)-synergistically enhances the naive conversion efficiency of reported conversion protocols. Single-cell RNA sequencing (scRNA-seq) with RNA velocity analyses and Totem trajectory mapping identified an intermediate state bridging the primed and naive states. These cells showed three upregulated gene groups: (1) pluripotency genes (e.g., Pou5f1 and Nanog), (2) naive state-related genes (e.g., Dnmlt3l and Alpg), and (3) differentiation-suppressive genes (e.g., Rest and Hhla1). These findings establish a simple induction method that illuminates underlying mechanisms and enables broad applications through efficient naive conversion.
    Keywords:  cell biology; developmental biology; stem cells research
    DOI:  https://doi.org/10.1016/j.isci.2026.115569
  52. Am J Physiol Endocrinol Metab. 2026 Apr 30.
      Placental insufficiency causes fetal hypoxemia and hypoglycemia and is a major driver of fetal growth restriction (FGR). In FGR skeletal muscle, mitochondrial respiration is reduced, partially due to altered mitochondrial protein abundance. We have shown that maternal oxygen and fetal glucose supplementation alleviates fetal hypoxemia and hypoglycemia and improves skeletal muscle satellite cell proliferation. However, its effects on muscle mitochondrial respiratory function and proteomic profiles remain unknown. Here, we tested whether correcting fetal hypoxemia and hypoglycemia restores mitochondrial oxidative phosphorylation and normalizes mitochondrial proteomic profiles in FGR sheep skeletal muscle. Placental insufficiency and FGR were induced by maternal hyperthermia during gestation. Near-term fetuses were chronically catheterized and received 7-10 days of maternal tracheal oxygen insufflation and fetal intravenous (IV) glucose infusion (FOG) or maternal air insufflation and fetal IV saline infusion (FAS). Both were compared to normally-grown control fetuses without supplementation (CON). Principal component analysis of the mitochondrial proteome indicated that FOG clustered closer to CON than to FAS. Abundances of 48 of 80 proteins that were differentially expressed in FAS vs CON returned to CON levels with FOG supplementation. Mitochondria isolated from CON and FOG muscle had similar glutamate/malate-driven state 3 (ADP stimulated) respiration, and both rates were greater than FAS mitochondria. Mitochondrial complex I activity was lower in FAS compared to CON, and FOG showed an intermediate level that was not different from either group. Together, these findings indicate that prenatal oxygen and glucose supplementation rescued mitochondrial respiratory dysfunction and partially normalized mitochondrial proteome in FGR skeletal muscle.
    Keywords:  Intrauterine Growth Restriction; Intrauterine intervention; Mitochondria; Oxidative phosphorylation; Proteomics
    DOI:  https://doi.org/10.1152/ajpendo.00073.2026
  53. bioRxiv. 2026 Apr 15. pii: 2026.04.13.718178. [Epub ahead of print]
      Fragile X syndrome (FXS) is the leading cause of intellectual disabilities and autism, but a disease-modifying strategy remains unavailable. Recent studies have suggested reduced mitochondrial functions in FXS. However, the mechanisms underlying mitochondrial defects and their impact on FXS pathophysiology remain largely unclear. Here, we reveal a reduction in the mitochondrial master regulator peroxisome proliferator-activated receptor gamma coactivator 1-alpha (PGC-1α) in the mouse model of FXS, the Fmr1 knockout (KO) mice. We show that this impairment is caused by the inactivity of the transcription factor cAMP-response element-binding protein (CREB) in Fmr1 KO mice. Using the small molecule ZLN005, which induces AMP-activated protein kinase (AMPK)- and CREB-dependent elevation of PGC-1α in Fmr1 KO mice, we observed significantly increased mitochondrial functions and dynamics in cultured neurons in vitro and in the hippocampus in vivo. Furthermore, ZLN005 elicited a wide range of beneficial effects in Fmr1 KO mice, including enhanced inhibitory synaptic transmission, reduced circuit hyperexcitability, improved hippocampal synaptic plasticity, reduced cortical gamma-band oscillations, and improved interhemispheric coherence. Most importantly, we observed improved cognition and reduced autism-like behaviors in ZLN005-treated Fmr1 KO mice. Together, our findings identify AMPK-CREB signaling and PGC-1α as promising and selective therapeutic targets for FXS and reveal the broad impact of restoring PGC-1α on FXS pathophysiology.
    One Sentence Summary: Promoting PGC-1α Reverses FXS Pathophysiology.
    DOI:  https://doi.org/10.64898/2026.04.13.718178
  54. Cell Rep. 2026 Apr 29. pii: S2211-1247(26)00407-9. [Epub ahead of print]45(5): 117329
      Human cytomegalovirus (HCMV) is a leading cause of congenital infection and morbidity in immunosuppressed populations. Like all viruses, HCMV is an obligate intracellular parasite that extensively remodels host cell metabolism to support its replication, yet the precise underlying mechanisms and the potentially associated metabolic vulnerabilities remain poorly understood. Using a metabolism-focused screening platform, we identify EGLN prolyl hydroxylase activity as critical for HCMV infection. Our studies reveal that HCMV infection depends on EGLN1, which accumulates in mitochondria during infection. Inhibition of EGLN1 expression blocks HCMV-mediated mitochondrial activation, which in turn prevents the production of the deoxynucleoside triphosphate (dNTP) precursors necessary for dNTP pool expansion and viral DNA replication. Further, pharmacological EGLN inhibition attenuates viral infection in a humanized mouse model. Collectively, these data establish EGLN1 as a critical determinant of mitochondrial metabolic remodeling and virally-induced dNTP generation during HCMV infection, highlighting EGLN1 as a promising antiviral therapeutic target.
    Keywords:  CP: Metabolism; CP: Microbiology; EGLN; HCMV; HIF PHD; TCA cycle; adaptaquin; cytomegalovirus; metabolism; mitochondria
    DOI:  https://doi.org/10.1016/j.celrep.2026.117329
  55. Antibodies (Basel). 2026 Apr 20. pii: 38. [Epub ahead of print]15(2):
       BACKGROUND/OBJECTIVES: Mitochondria are dynamic organelles that continuously undergo balanced cycles of fusion and division to maintain optimal function. Mitochondrial division is mediated by Dynamin-Related Protein 1 (DRP1), a cytosolic large GTPase whose phosphorylation at serine 616 (DRP1-S616Ⓟ) promotes its translocation to the outer mitochondrial membrane and organelle division. Dysregulated mitochondrial division disrupts cellular homeostasis and contributes to disease pathogenesis, including cancer. Our prior work demonstrated that the oncogene-induced mitogen-activated protein kinase (MAPK) pathway constitutively phosphorylates DRP1 at serine 616, which is essential to cellular transformation and correlates with oncogene status in patient tissues. Similarly, DRP1-S616Ⓟ is subject to pharmacologic control by targeted therapies against oncogenic MAPK signaling.
    METHODS: Building upon this foundation, we developed and characterized a recombinant murine monoclonal antibody (referred to as 3G11) with high specificity for human DRP1-S616Ⓟ, raised against a peptide derived from the human DRP1 sequence.
    RESULTS: Using diverse experimental platforms, we demonstrate the robust utility of 3G11 to detect DRP1-S616Ⓟ in melanoma cell extracts and isolated organelles. Immunofluorescence revealed that pharmacologic inhibition of oncogenic MAPK signaling reduces DRP1-S616Ⓟ levels, which correlates with mitochondrial hyperfusion, while immunohistochemistry showed that elevated DRP1-S616Ⓟ expression in human tissues correlates with BRAFV600E disease.
    CONCLUSIONS: 3G11 is a new recombinant antibody for detecting DRP1-S616Ⓟ and supports studies of mitochondrial division in cancer. Together, these findings establish 3G11 as a specific, versatile, renewable, and cost-effective tool for studying mitochondrial division, with strong potential for clinical applications.
    Keywords:  BRAF; DRP1; cancer; melanoma; mitochondrial dynamics; oncogenes
    DOI:  https://doi.org/10.3390/antib15020038
  56. Front Gastroenterol (Lausanne). 2026 ;5 1802268
       Objective: Mitochondria in pancreatic acinar cells function as central hubs integrating calcium signaling, ATP production, redox balance, autophagy, secretion, and cell-death regulation through dynamic interactions with other organelles.
    Aim: To summarize current evidence on mitochondria-organelle interactions in pancreatic acinar cells and their relevance to acute pancreatitis.
    Methods: We performed a narrative review of experimental and translational studies addressing mitochondrial interactions with the endoplasmic reticulum, lysosomes, autophagosomes, peroxisomes, the cytoskeleton, plasma membrane, nucleus, lipid droplets, and secretory granules in pancreatic acinar cells and experimental acute pancreatitis.
    Results: Mitochondria-endoplasmic reticulum contacts emerged as major determinants of pathological Ca2+ transfer, mitochondrial depolarization, and ATP depletion. Impaired crosstalk with lysosomes and autophagosomes disrupted mitophagy and favored the persistence of dysfunctional mitochondria, defective vacuolar processing, and inflammatory amplification. Altered functional coupling with peroxisomes and lipid droplets intensified oxidative stress, fatty-acid disequilibrium, and lipotoxic injury, particularly in metabolically unfavorable settings. Disturbed interactions with the cytoskeleton and plasma membrane impaired mitochondrial positioning, local Ca2+ buffering, and the spatial organization of stimulus-secretion coupling. Mitochondria-to-nucleus signaling promoted stress-responsive and proinflammatory transcriptional programs, while mitochondrial failure in the apical secretory region indirectly facilitated defective exocytosis and premature zymogen activation. Collectively, these alterations shifted acinar cells from adaptive stress responses toward necrosis, local pancreatic damage, systemic inflammation, and organ failure.
    Conclusions: Mitochondria-associated inter-organellar networks are integral to acinar-cell homeostasis and critically influence the initiation and progression of acute pancreatitis. Their selective stabilization may represent a mechanistically grounded therapeutic direction.
    Keywords:  acute pancreatitis; inter-organellar interactions; mitochondria; mitochondria-associated membranes; pancreatic acinar cells
    DOI:  https://doi.org/10.3389/fgstr.2026.1802268
  57. Curr Issues Mol Biol. 2026 Mar 28. pii: 358. [Epub ahead of print]48(4):
      Neurodegenerative diseases (NDs) are increasingly considered neurometabolic disorders driven by early mitochondrial dysfunction, neuroinflammation, and synaptic alterations that precede clinical symptoms. This review summarises pre-clinical and experimental evidence suggesting that intermittent fasting (IF) may influence these early pathogenic processes by promoting metabolic switching, enhancing autophagy and mitochondrial quality control, and modulating neuroimmune pathways. We discuss recent advances in biomarker research supporting the early detection of neurodegenerative changes, including ultrasensitive analytical platforms that can identify neuronal, glial, and synaptic injury during preclinical stages. By integrating these biomarker developments with findings from human and experimental intermittent fasting studies, we highlight how high-sensitivity assays provide quantifiable insights into the neurometabolic effects of fasting. Furthermore, we discuss how precision nutrition strategies incorporating multimarker panels, phenotypic and epigenetic signatures, and longitudinal multi-omics profiling may facilitate personalised intermittent fasting protocols and improve monitoring of biological responses. Overall, these findings underscore the relevance of a clinical biochemistry perspective integrating advanced biomarker technologies to evaluate the neurometabolic effects of intermittent fasting as a potential early neuroprotective strategy for individuals at risk of neurodegeneration.
    Keywords:  intermittent fasting; mitochondrial quality control; neurodegenerative diseases; neuroinflammation; neurometabolic pathways; precision nutrition; ultrasensitive biomarkers
    DOI:  https://doi.org/10.3390/cimb48040358
  58. PLoS One. 2026 ;21(4): e0347781
      Mitochondrial quality control is a crucial factor governing self-renewal capacity, maintenance of metabolic balance, and cellular longevity in stem cells. Impaired mitophagy significantly contributes to cellular senescence, causing accumulation of damaged mitochondria and impaired proliferative capacity of cells, leading to reduced therapeutic efficiency. This study explores mitophagy's role in regulating senescence in human adipose-derived mesenchymal stem cells (HADMSCs) and evaluates the therapeutic potentiality of antioxidants-melatonin and coenzyme Q10 (CoQ10) targeting mitochondria. It also examines the impact of antioxidant intervention aimed at improving the fate and survival, thereby establishing a connection between metabolic reprogramming and mitophagy. Our study found that stress-induced HADMSCs have reduced Mitochondrial Membrane potential (MMP), increased ROS, and increased senescence-associated β-galactosidase activity as observed through fluorescence-based imaging and biochemical assays. It was observed that antioxidant intervention has prevented the damage caused by the stress and reduced mitochondrial ROS and lipid peroxidation and has significantly restored mitophagy markers like Parkin, NDP52, BNIP3, BNIP3L/Nix, and LC3B. Our findings suggest that antioxidants induced pharmacological stimulation of mitophagy could potentially reverse stem cell aging and prevent functional decline, thereby improving regeneration and offering new insights and perspectives on mitochondrial health for improved efficiency of stem cell transplantation, maintenance and longevity of HADMSCs.
    DOI:  https://doi.org/10.1371/journal.pone.0347781
  59. Aging Dis. 2026 Apr 14.
      Aging and biological sex modulate cardiomyopathy through interconnected metabolic, inflammatory and mitochondrial pathways. Aging impairs Sirt1/Sirt3-AMPK signaling, promotes low-grade inflammation and mitochondrial dysfunction, while sex hormones shape dimorphic resilience and vulnerability across the life course. In dilated cardiomyopathy (DCM) and inflammatory cardiomyopathy (DCMI), age aggravates Sirt1 loss, triggers compensatory AMPK activation and reduces mitochondrial proteins (TOM40/TIM23/SOD2), particularly in older men. In DCMI, Sirt1 levels stay stable but processes differ by sex. Older men show increased mitophagy; women have impaired biogenesis. Inflammaging with elevated NF-κB/IL-12 and macrophage infiltration is stronger in men. E2 suppresses NF-κB/ROS via ERα/β and promotes M2 polarization, whereas testosterone enhances PGC-1α-dependent metabolism but amplifies fibrosis. Collectively, these findings define an age-sex framework of cardiomyopathy vulnerability and support precision strategies targeting sirtuins, inflammasomes and hormone-related pathways to slow or modify disease progression.
    DOI:  https://doi.org/10.14336/AD.2025.1591
  60. iScience. 2026 May 15. 29(5): 115453
      Mitochondrial genome (mtDNA) presents higher fold mutation rates in cancers, creating heteroplasmy. While mtDNA mutations are drivers of cancers, heteroplasmic mutations appear theoretically unlikely drivers. However, whether high homoplasmy can characterize the early stage of cancers, along with high mtDNA genome coverage, has not yet been explored. Here, we directly profile stage I treatment naive pancreatic cancer patients' cfDNA using high throughput genome sequencing technology. Our analysis uncovered an elevated mitochondrial, not nuclear, genome coverage, correlating with high homoplasmy and rates of single-nucleotide variants. Heteroplasmy is the most expected and common biologically relevant mitochondrial genomic state in cells, but it can disrupt cellular phenotype and fitness. Conversely, homoplasmy is uncommon but can be selected for in certain cellular contexts. The high mtDNA coverage, along with a high mutation load at stage I of this cancer, concomitantly with a high homoplasmy, argues that mtDNA homoplasmy and its associated mutations accumulated non-passively.
    Keywords:  biological sciences; omics
    DOI:  https://doi.org/10.1016/j.isci.2026.115453
  61. Medicine (Baltimore). 2026 May 01. 105(18): e47264
       RATIONALE: Mitochondrial encephalomyopathy with lactic acidemia and stroke-like episodes (MELAS) syndrome is a maternally inherited mitochondrial disorder caused by mutations in mitochondrial DNA, most commonly the m.3243A>G variant. This mutation impairs oxidative phosphorylation, leading to inadequate cellular energy production, particularly in high-demand tissues such as the brain and muscles. The resultant energy deficit manifests as neurological and muscular dysfunction, including stroke-like episodes, seizures, and lactic acidosis.
    PATIENT CONCERNS: Twin brothers presented with heterogeneous clinical characteristics. The elder twin experienced seizures, blurred vision, hypertrichosis, exercise intolerance, and had learning difficulties since age 10. The younger twin developed hearing loss at age 12, followed by persistent epileptic seizures 3 months later. Both had a history of progressive neurological and multisystemic symptoms suggestive of a metabolic disorder.
    DIAGNOSES: Diagnostic evaluations included electroencephalography (EEG), which showed widespread mixed high-amplitude slow waves, and cranial magnetic resonance imaging, which revealed migratory lesions that changed with recurrent episodes. Genetic testing confirmed the m.3243A>G mutation in both twins. Their mother was identified as an asymptomatic carrier with an estimated heteroplasmy level of 30.79%.
    INTERVENTIONS: The elder twin was initially treated with acyclovir (antiviral) and methylprednisolone (anti-inflammatory) for suspected viral encephalitis, with symptomatic support. After genetic confirmation of MELAS, supportive therapies included coenzyme Q10, adenosine triphosphate disodium, levocarnitine, and arginine. During recurrent admissions for status epilepticus, antiepileptic regimens were maintained or adjusted, and imaging (magnetic resonance imaging/electroencephalogram) was repeatedly used for monitoring. His brother received similar interventions - levetiracetam, coenzyme Q10, and adenosine triphosphate disodium - upon diagnosis, with additional management for seizures, headaches, and gastrointestinal symptoms.
    OUTCOMES: Both twins were definitively diagnosed with MELAS syndrome. The elder twin was diagnosed first based on clinical and genetic findings, while the younger twin was diagnosed after the emergence of hearing loss and seizures. The condition highlights the progressive and variable nature of MELAS.
    LESSONS: The case underscores the significant phenotypic heterogeneity of MELAS, which often leads to misdiagnosis or delayed diagnosis. Early genetic testing is critical for accurate identification and prompt intervention. Family screening is recommended due to the maternal inheritance pattern, and tailored management should address the multifaceted clinical manifestations.
    Keywords:  MELAS; epilepsy; gene mutation; m.3243A>G; treatment; twins
    DOI:  https://doi.org/10.1097/MD.0000000000047264
  62. NPJ Syst Biol Appl. 2026 Apr 25.
      Analyzing single omics and integrating multimodal omics datasets to capture functional dysregulation in disease remains challenging. Here, we propose a bioinformatics framework that leverages curated datasets of protein complexes ('complexome') as a foundation for proteomics data integration. Available for human and other model organisms, the complexome provides a global view of cellular function, enabling queries with proteomics datasets. We first benchmarked how protein abundances across human tissues shape distinct complexomic profiles, serving to fingerprint biological activity. Next, we analyzed complexome remodeling using disease versus control proteomics quantifications. Using proteomics data from fibroblasts of patients with genetically confirmed metabolic defects, we identified significant perturbations in mitochondrial oxidative phosphorylation complexes and additional complexes involved in wider mitochondrial functions. The complexome provides a systems-wide approach to dissect mechanisms underlying disease-related functional and phenotypic changes by mapping measured protein-level perturbations to specific molecular complexes. The software is available as a Python notebook at https://github.com/mguharoy/Complexome.
    DOI:  https://doi.org/10.1038/s41540-026-00716-0
  63. bioRxiv. 2026 Apr 14. pii: 2026.04.12.718013. [Epub ahead of print]
      The ectonucleotide pyrophosphatase/phosphodiesterase 1 (ENPP1) has long been linked with metabolic diseases, with the common ENPP1 K173Q (historically K121Q) variant conferring increased risk for type 2 diabetes (T2D). However, the mechanistic basis of this association has remained unclear. Here, we demonstrate that the K173Q variant has decreased cGAMP hydrolysis activity, suggesting that this loss of enzymatic function could contribute to its pathogenesis. Using a cGAMP-hydrolysis-deficient knock-in mouse ( Enpp1 H362A ), we show that selective loss of this activity leads to a primary defect in energy expenditure and exacerbates high-fat diet (HFD)-induced weight gain and insulin resistance. An unbiased in vivo glucose-uptake screen reveals brown adipose tissue (BAT) as a focal site of metabolic impairment, characterized by profound extracellular cGAMP accumulation and a selective failure of insulin-stimulated glucose uptake. Mechanistically, we demonstrate that nutrient excess drives mitochondrial DNA leakage in brown adipocytes, triggering cGAMP production and export. Excess cGAMP directly propagates STING-dependent suppression of glucose uptake and lipogenesis in brown adipocytes. Additionally, when ENPP1-mediated clearance is compromised, extracellular cGAMP acts as a paracrine immunotransmitter that remodels the BAT microenvironment by recruiting and polarizing macrophages toward an M1-like phenotype. Together, our findings nominate the impaired ENPP1-dependent buffering of extracellular cGAMP as one mechanism by which ENPP1 variants influence metabolic homeostasis.
    DOI:  https://doi.org/10.64898/2026.04.12.718013
  64. Redox Biol. 2026 Apr 22. pii: S2213-2317(26)00183-7. [Epub ahead of print]93 104185
      Plasmacytoid dendritic cells (pDCs) are innate immune sentinels uniquely specialised in the rapid and potent production of type I interferons (IFN-I) during viral infection. While this capacity is essential for antiviral defence, sustained pDC activation is a central feature of numerous autoimmune and inflammatory disorders. Although the molecular pathways governing nucleic acid sensing and IFN-I induction have been extensively characterised, the metabolic and redox mechanisms that support, and limit pDC function remain incompletely understood. Emerging studies reveal that pDC activity is tightly linked to a specialised redox-metabolic programme involving mitochondrial respiration, reactive oxygen species (ROS), and endolysosomal signalling networks. In this review, we integrate current evidence to propose that pDCs operate within a tightly regulated redox window that permits effective acute antiviral responses but renders them vulnerable to metabolic stress and dysregulation upon chronic stimulation. We examine how mitochondrial fitness, NAD+ homeostasis, ROS dynamics, and endolysosomal redox control collectively influence pDC activation, resolution of inflammation, and pathogenic persistence. By reframing pDC biology through a redox-metabolic perspective, we highlight new conceptual insights into IFN-I-driven disease and identify potential therapeutic strategies to selectively modulate pathogenic pDC responses.
    Keywords:  Autoimmunity; Immunometabolism; Interferons; Mitochondria; NAD(+); Plasmacytoid dendritic cells; Redox signalling; Viral infection
    DOI:  https://doi.org/10.1016/j.redox.2026.104185
  65. Sci Transl Med. 2026 Apr 29. 18(847): eadr1062
      Optic neuropathies cause irreversible vision loss. Transplantation of pluripotent stem cell (PSC)-derived retinal ganglion cells (RGCs) offers one potential therapeutic avenue to restore vision in patients suffering from optic neuropathies if the donor neurons survive long term in the recipient eye and develop synaptic connections in the retinal inner plexiform layer (IPL) and subcortical visual centers, which has been difficult to achieve. Previous work in mouse retinal explant cultures has shown that enzymatic digestion of the retinal internal limiting membrane (ILM) promotes migration of transplanted RGCs into the recipient retina. Here, we examined donor RGC survival and engraftment in immunosuppressed mice, rats, and rhesus macaques and in postmortem human retinal explant cultures. Using three separate human PSC lines and three independent methods of ILM disruption (including enzymatic, developmental, and mechanical approaches), we demonstrated that the ILM is a barrier to retinal engraftment of intravitreally delivered human PSC-derived RGCs. Across models, ILM disruption was associated with greater donor RGC survival over 2 to 8 weeks and enabled migration of donor neuronal somata into the endogenous RGC layer, where they elaborated dendrites into the IPL and extended axons that followed the course of the endogenous retinal nerve fiber layer into the optic nerve head, findings that were negligible with intact ILM. Further, ILM disruption enabled donor RGCs to synaptically integrate into IPL circuits, conferring light responsivity in rodents. These findings have important implications for enabling neuronal replacement therapies to restore vision in patients with optic neuropathy.
    DOI:  https://doi.org/10.1126/scitranslmed.adr1062
  66. J Med Genet. 2026 Apr 27. pii: jmg-2026-111514. [Epub ahead of print]
      Developmental epileptic encephalopathy (DEE) comprises neurodevelopmental disorders with early-onset seizures and developmental impairment. Despite >900 implicated genes, many patients remain undiagnosed after short-read sequencing (SRS). We assessed long-read genome sequencing (LR-GS) in 38 previously unsolved infantile-onset DEE probands (10 singletons, 28 trios). Variant detection included single nucleotide variants (SNVs), structural variants, copy number variants and short tandem repeats in established repeat expansion disease genes. LR-GS identified candidate variants in 8 out of 38 probands (21%) missed by SRS: five large deletions, one SNV in a low-mappability region of NSF, one case resolved via haplotype phasing of compound heterozygous SNVs without parental samples and one case where LR-GS detected an allele missed due to coverage gaps. An additional eight probands (21%) harboured variants technically detectable by SRS but were missed due to newly associated genes, synonymous variants lacking splicing evaluation or prior analytic pipelines. LR-GS substantially increases diagnostic yield in unsolved infantile-onset DEE, supporting its incorporation into clinical workflows as a second-tier genetic test for otherwise unsolved neurodevelopmental disorders.
    Keywords:  Epilepsy; Genomics
    DOI:  https://doi.org/10.1136/jmg-2026-111514
  67. Annu Rev Biomed Data Sci. 2026 Apr 28.
      Deep mutational scanning (DMS) has emerged as a transformative tool for dissecting individual protein function and broader cell biology. DMS methods enable comprehensive interrogation of sequence-function relationships by systematically testing thousands of genetic variants within a pool for their effect(s) on diverse phenotypes. This review focuses on how these approaches are revolutionizing mechanistic protein biology, cell biology, and pharmacological research. We present a conceptual framework to organize genetic perturbations with phenotypic readouts along a nested cellular continuum-from protein folding and biogenesis to trafficking, posttranslational modification, protein-protein interactions, and downstream signaling. We highlight recent advances in mapping allosteric networks, pharmacologic mechanisms, and multiphenotype screening technologies. These mechanistic insights are reshaping our understanding of protein function at the residue level and informing our understanding of drug action, allostery, the interpretation of rare variants, and protein engineering strategies.
    DOI:  https://doi.org/10.1146/annurev-biodatasci-092624-104436
  68. Cell Commun Signal. 2026 May 01.
      Mitochondrial dysfunction resulting in mitochondrial DNA (mtDNA) leakage is one of the main triggers of immune responses in systemic lupus erythematosus (SLE). In contrast, mitochondrial RNA (mtRNA) leakage and its role in SLE remains poorly understood. Interferon-alpha (IFN-α) and immune complexes (ICs) are both pathogenic contributors to SLE. Following the detection of increased mtRNA in the serum of patients with SLE, we explored the mechanisms of mtRNA leakage. Exposure to IFN-α at 100 U/ml, a pathophysiological concentration detected in SLE patients with mild to moderate disease activity, resulted in mitochondrial permeability transition pore (mPTP) opening and voltage dependent anion channel 1 (VDAC1) oligomerization, leading to mtRNA leakage and downstream inflammatory pathway activation in bone marrow-derived macrophages (BMDMs) of mice. However, we did not observe the activation of BCL2 antagonist/killer 1 (BAK) and BAK/BCL2-associated X (BAX) (BAX/BAK) pores and mitophagy does not play roles in these effects. Overloaded mitochondrial calcium released from the endoplasmic reticulum is likely responsible for mitochondrial pore opening. Similar effects were observed with ICs treatment. Several commonly recognized events contributing to mitochondrial pore opening such as cell death, apoptosis and changes of mitochondrial membrane potential were not detected and a pan-caspase inhibitor Z-VAD-FMK could not block IFN-α and ICs-induced mtRNA release. Our studies demonstrated an unexpected phenomenon that a pathophysiological concentration of IFN-α and ICs can selectively induce mitochondrial pore opening leading to mtRNA release in primary macrophages.
    Keywords:  Interferon-alpha; Macrophages; Mitochondria; Mitochondrial RNA; Mitochondrial pore; Systemic lupus erythematosus
    DOI:  https://doi.org/10.1186/s12964-026-02910-3
  69. Neuropsychopharmacology. 2026 Apr 30.
      Mitochondria are central to neuronal bioenergetics, supporting the high metabolic demands required for synaptic signaling and network activity. Yet how neurons adapt their activity to rapid fluctuations in energy supply-and how such adaptations shape behavior-remains poorly understood. We previously showed that acute pharmacological manipulation of mitochondrial complex activity in the nucleus accumbens (NAc) affects motivated behaviors, which led us to hypothesize that medium spiny neurons (MSNs) can rapidly adjust their output in response to bioenergetic levels. To test this hypothesis, we examined how acute mitochondrial inhibition alters MSN function using mouse brain slices. Inhibition of mitochondrial complex I with the selective inhibitor rotenone reduced MSN intrinsic excitability, an effect that was counteracted by intracellular ATP replenishment. We next asked whether ATP-sensitive potassium (K-ATP) channels, canonical regulators of membrane excitability under metabolic stress, contribute to these responses. Histological analyses revealed specific expression of Kir6.2 subunits in both D1- and D2-MSNs, as compared to non-MSNs, and electrophysiological recordings showed that K-ATP channel activation blockade prevented rotenone-induced reductions in MSN excitability. In behavioral assays, complex I inhibition impaired effort-related performance, an effect that was rescued by K-ATP channel blockade. These findings identify K-ATP channels in MSNs as key mediators that sense acute changes in neuronal energy state and translate them into rapid adjustments in NAc excitability and behavior.
    DOI:  https://doi.org/10.1038/s41386-026-02429-8
  70. Sci Adv. 2026 May;12(18): eaea6630
      The integrated stress response (ISR) suppresses global translation while allowing selective synthesis of key regulatory proteins. However, how translation persists during ISR remains unclear. In eukaryotes, the 5'-cap of mRNAs is bound by either the cap-binding complex (CBC) or eIF4E. We show that under stress, CBC-bound mRNAs recruit eIF2A, an alternative initiation factor, to sustain translation when eIF4E-dependent translation is inhibited. Human embryonic stem cells (hESCs), which inherently exhibit ISR, continue proliferating due to a compensatory increase in eIF2A. This increase ensures CBC-dependent translation (CT) of essential cell cycle regulators. Notably, yes-associated protein (YAP), a key proliferation factor, is a major CT target driving stress-resistant stem cell proliferation. Our findings reveal CT as a critical pathway that preserves protein synthesis and proliferation under stress.
    DOI:  https://doi.org/10.1126/sciadv.aea6630
  71. Nat Struct Mol Biol. 2026 Apr 29.
      During apoptosis, the BCL-2 family members BAX and BAK oligomerize and form a pore to mediate the decisive step of mitochondrial outer membrane permeabilization. However, the contribution of additional cellular components to apoptotic pore dynamics remains poorly understood. Here we map the protein environment of the apoptotic pore using in situ proximity labeling and identify the mitochondrial carrier homolog protein MTCH2 localizing nearby BAX and BAK assemblies specifically under apoptotic conditions. We show that cells lacking MTCH2 exhibit delayed BAX and BAK oligomerization at the single-particle level, which can be rescued by addition of lysophosphatidic acid. Accordingly, MTCH2 depletion decreases not only apoptosis sensitivity but also sublethal mitochondrial permeabilization during bacterial infection, mitochondrial DNA release into the cytosol and cGAS-STING activation under impaired caspases. Our findings uncover a key role of MTCH2 in promoting BAX and BAK high-order assembly with functional consequences for apoptotic pore growth and downstream responses.
    DOI:  https://doi.org/10.1038/s41594-026-01805-8