bims-cediti Biomed News
on Cell death in innate immunity, inflammation, and tissue repair
Issue of 2026–05–24
eleven papers selected by
Kateryna Shkarina, Universität Bonn



  1. Nat Commun. 2026 May 22.
      Inflammasomes are cytosolic multiprotein complexes facilitating the maturation and release of the inflammatory cytokines interleukin (IL)-1β and IL-18 and pyroptosis. ASC (apoptosis-associated-speck-like protein containing a CARD) is the central inflammasome adaptor. ASC polymerization is crucial for inflammasome assembly, and ASC particle release propagates inflammasome responses to bystander cells. However, control of inflammasome and ASC particle assembly to limit chronic inflammation and the emergence of autoinflammatory diseases is still incompletely understood. Here, we show that the E3 ubiquitin ligase TRIM (tripartite-motif-containing protein) 21, a common autoantigen in autoimmune diseases, is involved in inflammasome assembly. Specifically, TRIM21 binds to and ubiquitinates ASC to facilitate ASC/NLRP3 interactions, ASC polymerization and the release of ASC/TRIM21-containing particles during pyroptosis in human and mouse macrophages. Furthermore, we detect systemic ASC/TRIM21 particles and autoantibodies in human and mouse autoinflammatory disease. Thus, our findings highlight a previously unrecognized role of TRIM21 as an inflammasome component and driver of autoinflammation.
    DOI:  https://doi.org/10.1038/s41467-026-73350-3
  2. J Immunol. 2026 May 14. pii: vkag111. [Epub ahead of print]215(5):
      The cause of inflammatory bowel disease (IBD) is not known, but both innate and adaptive immunity contribute to IBD pathogenesis. To better understand the contributions of innate immunity to IBD, we have generated a mouse model of IBD that occurs spontaneously in the absence of adaptive immunity. This model is 100% penetrant, early onset, and driven by microbes. Here, we report that the colitis in this model exhibits extensive cell death in the gut mucosa, including cell death with features of apoptosis, necroptosis, and pyroptosis. This innate colitis and mucosal cell death was dependent on tumor necrosis factor (TNF). Deletion of interferon γ (IFNγ) markedly suppressed cell death and release of interleukin 1 (IL1) in the intestinal mucosa but did not prevent colitis. Production of TNF by monocyte lineage cells was dependent on IFNγ, but neutrophil production of TNF was independent of IFNγ. Depletion of TNF in IFNγ-deficient mice suppressed innate colitis. Thus, IFNγ is required for cell death and release of IL1 in the gut mucosa but is dispensable for innate colitis. These results indicate that TNF and IFNγ synergize to promote gut mucosal cell death but that TNF alone can drive innate colitis when cell death and IL1 release are reduced by the absence of IFNγ.
    Keywords:  TNF; cell death; colitis; innate immunity; interferon-gamma
    DOI:  https://doi.org/10.1093/jimmun/vkag111
  3. J Immunol. 2026 May 14. pii: vkag085. [Epub ahead of print]215(5):
      NLRP3 inflammasome activation drives interleukin (IL)-1β and IL-18 cleavage and secretion and induces pyroptosis. The ketone body β-hydroxybutyrate (BHB), produced during metabolic stress such as caloric insufficiency, has been reported to inhibit this pathway. However, the conditions that enable this effect, and whether it extends to other short-chain carboxylic acids (SCCAs), are not well defined. Using adenosine triphosphate-stimulated J774 mouse macrophages and human peripheral blood mononuclear cells, we quantified IL-1β secretion to determine the pH dependence of BHB and related SCCAs in inhibiting NLRP3 activation. Both enantiomers of β-hydroxybutyric acid (BHBA) inhibited IL-1β secretion, whereas sodium β-hydroxybutyrate (NaBHB) and sodium hydroxide-neutralized BHBA did not. Acidifying NaBHB stock solutions or the treatment media, or allowing endogenous acidification during cell culture, restored NaBHB's ability to inhibit NLRP3 activation. Several other 3- to 6-carbon SCCAs also inhibited inflammasome activation in a pH-dependent manner and prevented pyroptotic cell death. Activation of the free fatty acid receptor 3 (GPR41/FFAR3) both mimicked and enhanced the inhibitory effects of BHBA. Together, these findings demonstrate that acidic conditions enable BHB and multiple SCCAs to suppress NLRP3 inflammasome activation, partly through GPR41/FFAR3. This expands the set of metabolites that can modulate this key proinflammatory pathway during energetic stress and suggests optimized conditions for the potential therapeutic use of ketone bodies as anti-inflammatory agents.
    Keywords:  NLRP3 inflammasome; beta-hydroxybutyrate; inflammation; ketone bodies; macrophage
    DOI:  https://doi.org/10.1093/jimmun/vkag085
  4. mBio. 2026 May 20. e0065526
      Many pathogens target the host actin cytoskeleton through the delivery of actin depolymerizing toxins, including mono-ADP-ribosyltransferases (mART), ultimately triggering host cell death. Despite the importance of mARTs in pathogen virulence, it remains unclear whether actin ribosylation is required for mART-dependent cell death, and how actin depolymerization leads to cell death. Using the non-typhoidal Salmonella enterica Typhimurium-encoded mART, SpvB, we report that cell death is induced exclusively through ribosylation of actin. We found cell death to be morphologically and mechanistically distinct from apoptosis as well as any previously reported mode of cell death. Instead, our data identify the Hippo signaling MAP4Ks as the essential host cell sensors of actin depolymerization signaling through JNK to facilitate vacuolization and host cell death. Cell death following treatment of cells with the actin depolymerizing agent latrunculin A followed the same pathway, identifying a conserved mechanism of cell death. Therefore, we identify MAP4K family members as key regulators of an atypical caspase-independent cell death induced by actin depolymerization, building on our understanding of host-cell death signaling and mechanisms of bacterial virulence.
    IMPORTANCE: Host cell death plays a critical role as an intrinsic defense mechanism against infection and disease. However, many pathogens subvert cell death signaling to enhance their replication and survival. Here, we show that the mono-ADP ribosyl transferase family of toxins encoded by pathogens of global importance, including Salmonella spp., Neisseria spp. and C. difficile induces actin depolymerization leading to MAP4K activation and JNK-dependent cell death. Through mechanistically characterizing this atypical cell death pathway, our study identifies and positions key components of a previously undescribed cell death pathway and broadens our understanding of bacterial pathogenesis and virulence.
    Keywords:  actin; cell death; host–pathogen interactions; pathogenesis
    DOI:  https://doi.org/10.1128/mbio.00655-26
  5. Cell Chem Biol. 2026 May 18. pii: S2451-9456(26)00146-7. [Epub ahead of print]
      Macrophage fate decisions during infection are commonly framed as receptor-proximal transcriptional choices. We propose that the functional outcome results from a "kinetic race," a dynamic proteostatic competition among protein synthesis, post-translational modifications (PTMs), and degradation. Building on experimental evidence of infection-induced proteostasis, we outline a conceptual "turnover-first" framework. In this model, we hypothesize that the ubiquitin proteasome system (UPS), autophagy, and translational control create a master molecular timer that licenses or restrains pyroptosis, apoptosis, necroptosis, and PANoptosis. We detail how PTMs act as decision codes and present examples of how bacterial pathogens and viruses hijack this network, deploying specialized effectors to move death thresholds by host shutoff, ubiquitin/ISG15 editing, and autophagy evasion. We summarize the emerging chemical biology platforms allowing quantification of these "death competence codes" in real-time, and map drug-addressable nodes offering a systems level strategy to tune macrophage longevity and inflammatory output in sepsis and infectious disease.
    Keywords:  PTMs; cell death; infection; inflammation; protein turnover
    DOI:  https://doi.org/10.1016/j.chembiol.2026.04.011
  6. Commun Biol. 2026 May 21.
      Interleukin-33 (IL-33), an IL-1 family cytokine, is released during cell damage. However, the mechanism underlying IL-33 release is not fully understood. Here, we generate IL-33-mCherry-expressing mouse cell lines to monitor IL-33 release at single cell resolution. During necroptosis, SYTOX uptake that represents loss of membrane integrity, and IL-33-mCherry release occur simultaneously, indicating that Mlkl-mediated damage causes immediate membrane rupture. In contrast, some apoptotic and pyroptotic cells exhibit delayed IL-33-mCherry release relative to SYTOX uptake, whereas in other cells, both events occur simultaneously. IL-33-mCherry release is only modestly affected by loss of Gsdmd or Gsdme but is markedly reduced in Ninjurin-1 (Ninj1) knockout cells. These findings indicate that Gasdermins act upstream, whereas Ninj1-mediated membrane rupture represents the principal mechanism of IL-33 release. The delay in IL-33-mCherry release in some cells implies that the activation of Ninj1 occurs with variable timing, thus contributing to cell-to-cell heterogeneity.
    DOI:  https://doi.org/10.1038/s42003-026-10300-1
  7. Cell Death Differ. 2026 May 20.
      Necroptosis, driven by RIP3, is critical for intestinal homeostasis but requires stringent regulation to prevent inflammatory pathology. While inhibitory checkpoints of RIP3 are known, mechanisms enabling its physiological activation remain unclear. We identify PRMT5-mediated symmetric di-methylation of RIP3 at arginine 479 (R479) serves as a gatekeeper specifically suppresses RIP1- but not ZBP1- driven necroptosis in intestinal epithelial cells (IECs). Notably, even though STORM super-resolution imaging and molecular dynamics simulations revealed that R479 methylation adjacent to the RHIM domain sterically blocks RIP3 oligomerization both with RIP1 and ZBP1. Mice harboring IEC-specific Rip3R479K knockin mutation developed spontaneous necroptosis-driven colitis in vivo, directly linking this PTM to pathogenesis. Leveraging these insights, we engineered an SDMA-mimetic peptide that competitively inhibit necroptosis, rescuing Prmt5-deficient mice from lethal colitis without disrupting global signaling homeostasis. Unlike conventional kinase inhibitors, this "methylation mimicry" strategy selectively targets pathogenic cell death, offering a therapeutically actionable advance for IBD and related disorders.
    DOI:  https://doi.org/10.1038/s41418-026-01759-w
  8. Commun Biol. 2026 May 20.
      Anti-citrullinated protein antibodies (ACPAs), a hallmark of rheumatoid arthritis (RA), arise from citrullinated proteins presenting immunogenic neoepitopes that break self-tolerance. Citrullination is a post-translational modification catalyzed by peptidylarginine deiminases (PADs). Among five isoforms, PAD2 and PAD4 expressed in immune cells are most closely associated with RA pathogenesis. Although typically intracellular, PAD2 and PAD4 are detectable extracellularly in RA, yet the mechanisms governing their release remain unclear. Here, we show that NLRP3 inflammasome activation triggers PAD release from human neutrophils via an NLRP3-caspase-1-gasdermin D axis, independent of cell death. Inflammasome activation increases citrullination of intracellular proteins, while released PADs retain enzymatic activity and citrullinate extracellular substrates. In RA serum, PAD concentrations and PAD activity correlate with IL-1β, suggesting an analogous inflammasome-driven mechanism for extracellular PAD release in vivo. Collectively, these findings indicate that the NLRP3 inflammasome may promote autoimmunity in RA by amplifying citrullinated neoepitope generation that fuels ACPA production.
    DOI:  https://doi.org/10.1038/s42003-026-10277-x
  9. FASEB J. 2026 May 31. 40(10): e71911
      Ribotoxic stress response (RSR) is a translation-linked stress pathway that emerges when ribosomes stall and collide. Its upstream trigger is the MAP3K/ZAKα, a leucine-zipper- and SAM-containing kinase that relays ribotoxic stress to downstream programs shaping metabolism, immune signaling, and cell-fate decisions. Increasing evidence suggests that RSR also connects two major forms of programmed cell death-apoptosis and pyroptosis-by coordinating signaling crosstalk that shapes death outcomes. Disruption of this regulatory axis is associated with chronic inflammatory disorders, immune dysfunction, and malignancy. Here, we summarize current knowledge on the molecular mechanisms through which RSR interfaces with apoptotic and pyroptotic pathways, and we discuss its roles in cellular homeostasis and disease. Clarifying how RSR regulates cell-death signaling could guide the development of targeted therapeutic strategies for conditions involving dysregulated inflammation and cell death.
    Keywords:  ZAKα; apoptosis; pyroptosis; ribotoxic stress response; therapeutic target
    DOI:  https://doi.org/10.1096/fj.202600813RR
  10. Sci Rep. 2026 May 19.
      The human cathelicidin host defense peptide LL-37 is expressed by many cell types, including neutrophils, macrophages, and epithelial cells, and forms complexes with nucleic acids that can have either beneficial or detrimental health effects. We suggest that these differential impacts are directly connected to the extent of nucleic acid binding by LL-37. Here, we use phage λ DNA and techniques such as high-resolution video microscopy, gel electrophoresis, circular dichroism, and displacement assays to show that LL-37 binds non-specifically to dsDNA, condensing it, followed by formation of progressively larger complexes from smaller domains, until "complete" complexation is attained at a (w/w) ratio of DNA/LL-37 of 1:1.7. The morphology of these complexes is concentration-dependent, with relatively low LL-37 amounts yielding loosely aggregated DNA structures and higher LL-37 concentrations leading to well-defined, disc-like complexes of about 150 nm in diameter. The condensation of nucleic acids, which causes a loss of the characteristic B-DNA features, results from interactions of the phosphodiester backbone with cationic amino acid side chains of the peptide at physiological pH, most likely in A-T rich sequences of the nucleic acid. Our results show that the α-helical structure of the peptide with its amphipathic and hydrophobic surfaces is essential. Finally, we show that LL-37 complexation alters the structure of neutrophil extracellular traps (NETs), causing a significant reduction in projected NET area at high LL-37 concentrations. Our data suggest that LL-37 helps prevent nucleic acid dispersal and condenses dsDNA, which may impact the biophysics of NET clearance.
    Keywords:  Antimicrobial peptide; Condensation; Innate immunity; Intermolecular interactions; LL-37; Lambda DNA
    DOI:  https://doi.org/10.1038/s41598-026-48091-4