bims-ciryme Biomed News
on Circadian rhythms and metabolism
Issue of 2025–11–23
two papers selected by
Gabriela Da Silva Xavier, University of Birmingham



  1. Mol Neurobiol. 2025 Nov 22. 63(1): 132
      Circadian rhythms in clock gene expression are a global feature of neurons. While clock gene products have been shown to modulate plasticity at the synapse level, little is known about molecular circadian rhythms in neuroplasticity. In this study, we aim to establish circadian regulatory mechanisms of plasticity in the rat cerebral cortex. We show that the expression of the plasticity markers activity-regulated cytoskeleton-associated protein (Arc), brain-derived neurotrophic factor (Bdnf), and early growth response protein 1 (Egr1) exhibits marked circadian rhythms with increasing transcript levels during nighttime in the adult neocortex, but not in the hippocampus. Rhythmic expression of plasticity markers was restricted to postnatal stages. Lesion studies showed that rhythmic Arc, Bdnf, and Egr1 expression in the neocortex is regulated by the suprachiasmatic nucleus (SCN). High nocturnal Arc levels were partly restored by rhythmic subcutaneous infusion of corticosterone via an implanted programmable pump though without restoring rhythmic gene expression. Additionally, we show that the normal circadian Arc expression profile in the neocortex of cortex-specific Bmal1 clock gene knockout mice was disrupted compared to controls. In conclusion, our work suggests that the neuroplasticity of the neocortex exhibits circadian rhythmicity reflected by rhythmic plasticity markers controlled by a combination of the central clock of the SCN and the local circadian oscillator of the cerebral cortex.
    Keywords:  Cerebral cortex; Circadian rhythms; Clock gene expression; Neuroplasticity
    DOI:  https://doi.org/10.1007/s12035-025-05536-7
  2. bioRxiv. 2025 Oct 01. pii: 2025.09.30.679467. [Epub ahead of print]
      Circadian rhythms are pervasive among eukaryotes, and the underlying clocks share a common regulatory architecture - a negative feedback loop. A wealth of genetic and biochemical data underpin current perceptions of circadian oscillators but aspects of their cell biology remain cryptic, especially in syncytial systems. We employed novel microfluidic systems and a blind mutant that retains circadian function to simultaneously track multiple clock components in vivo across circadian cycles, revealing remarkable subcellular and subnuclear dynamics of clock proteins and providing insights into spatiotemporal regulation in a multinucleated system. Despite heterogeneity of clock gene (frq) expression, we find robust cycles in FRQ nuclear localization among all nuclei and document free diffusion of multiple clock components among nuclei. Within nuclei, clock components form distinct, small, highly dynamic nuclear bodies that persist throughout the cycle, occasionally co-localizing for circadian regulatory functions. This rich context of in vivo spatiotemporal information illustrates how separate nuclear clocks ensure synchronous regulation of cellular activities across a macroscopic syncytium.
    DOI:  https://doi.org/10.1101/2025.09.30.679467